RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 ZNF618Q5T7W0 954 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 MFSD4BQ5TF39 518 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 WDR93Q6P2C0 686 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 KLHL24Q6TFL4 600 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 MTHFD1LQ6UB35 978 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 TMCO3Q6UWJ1 677 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 KIAA1324Q6UXG2 1013 aaKnown RBP4.31□□□□□ -1.72
KDM3A-213ENST00000488971 ADGRG6Q86SQ4 1221 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 CCDC105Q8IYK2 499 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 NKAIN3Q8N8D7 197 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 PNPLA1Q8N8W4 532 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 GPR150Q8NGU9 434 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 CLEC4CQ8WTT0 213 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 R3HDM4Q96D70 268 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 RNFT2Q96EX2 444 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 AP1M1Q9BXS5 423 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 CLPBQ9H078 707 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 RANBP17Q9H2T7 1088 aaKnown RBP4.31□□□□□ -1.72
KDM3A-213ENST00000488971 MROH8Q9H579 483 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 AKIP1Q9NQ31 210 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 TLR8Q9NR97 1041 aaKnown RBP4.31□□□□□ -1.72
KDM3A-213ENST00000488971 SLC22A11Q9NSA0 550 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 SEPT11Q9NVA2 429 aaKnown RBP4.31□□□□□ -1.72
KDM3A-213ENST00000488971 ALKBH4Q9NXW9 302 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 KCND2Q9NZV8 630 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 SARDHQ9UL12 918 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 OSGIN2Q9Y236 505 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 RUSC2Q8N2Y8 1516 aa4.31□□□□□ -1.72
KDM3A-213ENST00000488971 SYNDIG1LA6NDD5 238 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 TEX22C9J3V5 150 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 P4HA2O15460 535 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 CA12O43570 354 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 TMPRSS11DO60235 418 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 LPXNO60711 386 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 STARD3NLO95772 234 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 ALDOAP04075 364 aaKnown RBP4.3□□□□□ -1.72
KDM3A-213ENST00000488971 FESP07332 822 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 PEPDP12955 493 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 CREB1P16220 341 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 ZNF37AP17032 561 aaPredicted RBP4.3□□□□□ -1.72
KDM3A-213ENST00000488971 HARS2P49590 506 aaKnown RBP4.3□□□□□ -1.72
KDM3A-213ENST00000488971 CLCN2P51788 898 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 SUMO2P61956 95 aaKnown RBP4.3□□□□□ -1.72
KDM3A-213ENST00000488971 CREB5Q02930 508 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 COL10A1Q03692 680 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 DEUP1Q05D60 604 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 CDK18Q07002 472 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 RESTQ13127 1097 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 EIF2B5Q13144 721 aaKnown RBP4.3□□□□□ -1.72
KDM3A-213ENST00000488971 DCTN2Q13561 401 aaKnown RBP4.3□□□□□ -1.72
KDM3A-213ENST00000488971 TDGQ13569 410 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 PTPAQ15257 358 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 ALDH1L2Q3SY69 923 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 CCDC184Q52MB2 194 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 RUNDC3AQ59EK9 446 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 RILPL1Q5EBL4 403 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 SPECC1Q5M775 1068 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 LY6G5CQ5SRR4 150 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 TREML2Q5T2D2 321 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 ARMC3Q5W041 872 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 SLC22A25Q6T423 547 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 PTCHD4Q6ZW05 846 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 VRK3Q8IV63 474 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 BEND2Q8NDZ0 799 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 TNIP2Q8NFZ5 429 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 MYCBPAPQ8TBZ2 947 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 RUFY2Q8WXA3 655 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 LPIN2Q92539 896 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 VOPP1Q96AW1 172 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 FKBP10Q96AY3 582 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 PRR25Q96S07 402 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 ADAM2Q99965 735 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 ALG8Q9BVK2 526 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 CINPQ9BW66 212 aaPredicted RBP4.3□□□□□ -1.72
KDM3A-213ENST00000488971 SAP30LQ9HAJ7 183 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 THAP1Q9NVV9 213 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 HCFC1R1Q9NWW0 138 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 DKK2Q9UBU2 259 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 ADD3Q9UEY8 706 aaKnown RBP4.3□□□□□ -1.72
KDM3A-213ENST00000488971 ZNHIT2Q9UHR6 403 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 NOL7Q9UMY1 257 aaKnown RBP4.3□□□□□ -1.72
KDM3A-213ENST00000488971 MAP3K2Q9Y2U5 619 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 SNX8Q9Y5X2 465 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 LYVE1Q9Y5Y7 322 aa4.3□□□□□ -1.72
KDM3A-213ENST00000488971 A0A1W2PQM1 296 aa4.29□□□□□ -1.72
KDM3A-213ENST00000488971 hCG_1807616A0A1W2PRN6 198 aa4.29□□□□□ -1.72
KDM3A-213ENST00000488971 ZNF213O14771 459 aa4.29□□□□□ -1.72
KDM3A-213ENST00000488971 TGFB1I1O43294 461 aa4.29□□□□□ -1.72
KDM3A-213ENST00000488971 TSPAN9O75954 239 aa4.29□□□□□ -1.72
KDM3A-213ENST00000488971 TJP3O95049 919 aa4.29□□□□□ -1.72
KDM3A-213ENST00000488971 DNTTP04053 509 aa4.29□□□□□ -1.72
KDM3A-213ENST00000488971 RHOP08100 348 aa4.29□□□□□ -1.72
KDM3A-213ENST00000488971 CSH1P0DML2 217 aa4.29□□□□□ -1.72
KDM3A-213ENST00000488971 CSH2P0DML3 217 aa4.29□□□□□ -1.72
KDM3A-213ENST00000488971 TMIGD3P0DMS9 266 aaPredicted RBP4.29□□□□□ -1.72
KDM3A-213ENST00000488971 ARSAP15289 507 aa4.29□□□□□ -1.72
KDM3A-213ENST00000488971 DDX6P26196 483 aaKnown RBP eCLIP4.29□□□□□ -1.72
KDM3A-213ENST00000488971 DUSP1P28562 367 aa4.29□□□□□ -1.72
KDM3A-213ENST00000488971 NLRP5P59047 1200 aa4.29□□□□□ -1.72
KDM3A-213ENST00000488971 TXNL4AP83876 142 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms