RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 CCL15Q16663 113 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 ATG16L1Q676U5 607 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 IL31Q6EBC2 164 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 STRADAQ7RTN6 431 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 DNAAF3Q8N9W5 541 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 MARK4Q96L34 752 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 CCDC106Q9BWC9 280 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 ULBP1Q9BZM6 244 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 DCLRE1BQ9H816 532 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 PIDD1Q9HB75 910 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 CHRAC1Q9NRG0 131 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 KRT82Q9NSB4 513 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 ZFATQ9P243 1243 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 SLC7A8Q9UHI5 535 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 MYBPHLA2RUH7 354 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 SDR42E2A6NKP2 422 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 E9PBE3 544 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 NEMP1O14524 444 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 ZBTB24O43167 697 aaPredicted RBP13□□□□□ -0.33
CLIC4-202ENST00000488683 KLHL41O60662 606 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 LTFP02788 710 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 UBTFL6P0CB48 400 aaPredicted RBP13□□□□□ -0.33
CLIC4-202ENST00000488683 CCNHP51946 323 aaPredicted RBP13□□□□□ -0.33
CLIC4-202ENST00000488683 CCNA1P78396 465 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 DEUP1Q05D60 604 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 ZBTB17Q13105 803 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 SLC25A52Q3SY17 297 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 TCHHL1Q5QJ38 904 aaPredicted RBP13□□□□□ -0.33
CLIC4-202ENST00000488683 LDLRAD1Q5T700 205 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 C4orf22Q6V702 233 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 LRRC74BQ6ZQY2 392 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 CLEC20AQ6ZU45 233 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 ARCQ7LC44 396 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 ULK2Q8IYT8 1036 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 DCLK2Q8N568 766 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 STMN2Q93045 179 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 ZNF333Q96JL9 665 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 CPA4Q9UI42 421 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 IPPQ9Y573 584 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 F8W810 466 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 EEF2KO00418 725 aaKnown RBP12.99□□□□□ -0.33
CLIC4-202ENST00000488683 SRGAP2BP0DMP2 458 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 ERCC2P18074 760 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 SNX16P57768 344 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 UBXN11Q5T124 520 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 CAPRIN2Q6IMN6 1127 aaKnown RBP12.99□□□□□ -0.33
CLIC4-202ENST00000488683 MARK2Q7KZI7 788 aaKnown RBP12.99□□□□□ -0.33
CLIC4-202ENST00000488683 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.99□□□□□ -0.337e-10■■■■■ 139.2
CLIC4-202ENST00000488683 FBXO41Q8TF61 875 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 BRI3BPQ8WY22 251 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 MS4A4AQ96JQ5 239 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 SORT1Q99523 831 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 ATXN3LQ9H3M9 355 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 MORF4L1Q9UBU8 362 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 PLIN3O60664 434 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 HUS1O60921 280 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 MYL3P08590 195 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 NCAM1P13591 858 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 EPHX2P34913 555 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 SCNN1AP37088 669 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 TUBB3Q13509 450 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 SNX17Q15036 470 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 RNF220Q5VTB9 566 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 FAM91A1Q658Y4 838 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 OLFML2BQ68BL8 750 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 TWF2Q6IBS0 349 aaKnown RBP12.99□□□□□ -0.33
CLIC4-202ENST00000488683 LRRC8BQ6P9F7 803 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 TMEM154Q6P9G4 183 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 TIFABQ6ZNK6 161 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 OTOP3Q7RTS5 596 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 STRA8Q7Z7C7 330 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 SCUBE1Q8IWY4 988 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 SMG8Q8ND04 991 aaKnown RBP12.99□□□□□ -0.33
CLIC4-202ENST00000488683 C3orf58Q8NDZ4 430 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 SPATA22Q8NHS9 363 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 MAPK15Q8TD08 544 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 HSFY1Q96LI6 401 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 CRTAC1Q9NQ79 661 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 GDAP2Q9NXN4 497 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 DLGAP2Q9P1A6 1054 aa12.99□□□□□ -0.33
CLIC4-202ENST00000488683 RPL26L1Q9UNX3 145 aaKnown RBP12.99□□□□□ -0.33
CLIC4-202ENST00000488683 CASTOR2A6NHX0 329 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 PTGESO14684 152 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 ZCCHC18P0CG32 403 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 SERPINB9P50453 376 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 BLMHQ13867 455 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 C1orf146Q5VVC0 180 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 ZNF280DQ6N043 979 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 TRIM42Q8IWZ5 723 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 ZNF781Q8N8C0 355 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 TINF2Q9BSI4 451 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 TUBB6Q9BUF5 446 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 SIK2Q9H0K1 926 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 LRRC4Q9HBW1 653 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 SNX15Q9NRS6 342 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 MIOSQ9NXC5 875 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 PLA2G4CQ9UP65 541 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 XPO1O14980 1071 aaKnown RBP12.98□□□□□ -0.33
CLIC4-202ENST00000488683 PHGDHO43175 533 aaKnown RBP12.98□□□□□ -0.33
CLIC4-202ENST00000488683 DCXO43602 365 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms