RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 FAM131BQ86XD5 332 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 GPR161Q8N6U8 529 aaKnown RBP16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 RPRD1AQ96P16 312 aaPredicted RBP16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 HAPLN3Q96S86 360 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 NUP58Q9BVL2 599 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 ARRDC1-AS1Q9H2J1 176 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 CD93Q9NPY3 652 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 SEMA4GQ9NTN9 838 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 IFNKQ9P0W0 207 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 PAXBP1Q9Y5B6 917 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 OR51B4Q9Y5P0 310 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 IGLV3-10A0A075B6K4 115 aa16.44■□□□□ 0.22
CTDSP1-209ENST00000488627 IGHV1OR15-9A0A0B4J2B8 117 aa16.44■□□□□ 0.22
CTDSP1-209ENST00000488627 DDX3XO00571 662 aaKnown RBP eCLIP16.44■□□□□ 0.221e-9■□□□□ 10.9
CTDSP1-209ENST00000488627 SYNCRIPO60506 623 aaKnown RBP16.44■□□□□ 0.22
CTDSP1-209ENST00000488627 CNTN5O94779 1100 aa16.44■□□□□ 0.22
CTDSP1-209ENST00000488627 ASLP04424 464 aa16.44■□□□□ 0.22
CTDSP1-209ENST00000488627 MZF1P28698 734 aaPredicted RBP16.44■□□□□ 0.22
CTDSP1-209ENST00000488627 BYSLQ13895 437 aaKnown RBP16.44■□□□□ 0.22
CTDSP1-209ENST00000488627 CSRP2Q16527 193 aa16.44■□□□□ 0.22
CTDSP1-209ENST00000488627 FNDC3BQ53EP0 1204 aaKnown RBP16.44■□□□□ 0.22
CTDSP1-209ENST00000488627 ALFQ53S48 1182 aa16.44■□□□□ 0.22
CTDSP1-209ENST00000488627 STRADAQ7RTN6 431 aa16.44■□□□□ 0.22
CTDSP1-209ENST00000488627 TMPRSS6Q8IU80 811 aa16.44■□□□□ 0.22
CTDSP1-209ENST00000488627 CCDC117Q8IWD4 279 aaPredicted RBP16.44■□□□□ 0.22
CTDSP1-209ENST00000488627 ZNF366Q8N895 744 aa16.44■□□□□ 0.22
CTDSP1-209ENST00000488627 PRSS16Q9NQE7 514 aa16.44■□□□□ 0.22
CTDSP1-209ENST00000488627 USP36Q9P275 1121 aaKnown RBP16.44■□□□□ 0.22
CTDSP1-209ENST00000488627 TBC1D30Q9Y2I9 924 aa16.44■□□□□ 0.22
CTDSP1-209ENST00000488627 PCDHGA5Q9Y5G8 931 aa16.44■□□□□ 0.22
CTDSP1-209ENST00000488627 BCLAF3A2AJT9 711 aaKnown RBP16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 ZBTB24O43167 697 aaPredicted RBP16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 ZNF217O75362 1048 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 CLDN11O75508 207 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 SKILP12757 684 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 RRM1P23921 792 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 SDC4P31431 198 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 ADRA1BP35368 520 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 CDH4P55283 916 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 HDAC4P56524 1084 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 RPL7AP62424 266 aaKnown RBP16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 SLC12A1Q13621 1099 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 ARID5BQ14865 1188 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 ACBD5Q5T8D3 534 aaPredicted RBP16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 HGSNATQ68CP4 663 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 LRSAM1Q6UWE0 723 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 DNAAF5Q86Y56 855 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 KDM1BQ8NB78 822 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 OR2T3Q8NH03 318 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 SYN2Q92777 582 aaPredicted RBP16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 VCPIP1Q96JH7 1222 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 SPACA7Q96KW9 195 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 FEM1AQ9BSK4 669 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 SELENOOQ9BVL4 669 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 MTG2Q9H4K7 406 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 PRDM16Q9HAZ2 1276 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 ITM2CQ9NQX7 267 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 ZNF212Q9UDV6 495 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 SLCO3A1Q9UIG8 710 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 CAPN11Q9UMQ6 739 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 ERVW-1Q9UQF0 538 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 ABCA7Q8IZY2 2146 aa16.43■□□□□ 0.22
CTDSP1-209ENST00000488627 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 SRPRAP08240 638 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 ZNF806P0C7X5 589 aa16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 GZMAP12544 262 aa16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 PTGER3P43115 390 aa16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 OXCT1P55809 520 aa16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 ECT2LQ008S8 904 aa16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 KLHL30Q0D2K2 578 aa16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 ZNF177Q13360 481 aaPredicted RBP16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 MAMLD1Q13495 774 aa16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 CCDC6Q16204 474 aa16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 CDO1Q16878 200 aa16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 HNRNPA1L2Q32P51 320 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 SPDYCQ5MJ68 293 aa16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 KIAA1324Q6UXG2 1013 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 TMEFF1Q8IYR6 380 aa16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 SIPA1Q96FS4 1042 aa16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 MAGEB5Q9BZ81 275 aa16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 XPO4Q9C0E2 1151 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 TSPY26PQ9H489 355 aa16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 MPP6Q9NZW5 540 aa16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 SUN2Q9UH99 717 aa16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 USP18Q9UMW8 372 aa16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 CYP8B1Q9UNU6 501 aa16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 EML5Q05BV3 1969 aa16.42■□□□□ 0.22
CTDSP1-209ENST00000488627 TMCO5BA8MYB1 307 aa16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 E9PAM4 449 aa16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 MAP3K13O43283 966 aa16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 MOCS3O95396 460 aa16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 IGLV3-19P01714 112 aa16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 GYPCP04921 128 aa16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 GPD1P21695 349 aa16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 MPLP40238 635 aa16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 NUMBP49757 651 aa16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 ZNF143P52747 638 aaPredicted RBP16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 OGDHQ02218 1023 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms