RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 LRRC10BA6NIK2 292 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 MOCS3O95396 460 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 ADCY5O95622 1261 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 CYP1A1P04798 512 aaPredicted RBP18.31■□□□□ 0.52
ITGB1-215ENST00000488494 PDGFRAP16234 1089 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 HOXD12P35452 270 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 CXCR3P49682 368 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 IRX4P78413 519 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 DEUP1Q05D60 604 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 MTA1Q13330 715 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 SLC25A52Q3SY17 297 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 BRMS1LQ5PSV4 323 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 CXorf57Q6NSI4 855 aaKnown RBP18.31■□□□□ 0.52
ITGB1-215ENST00000488494 TRIM72Q6ZMU5 477 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 SND1Q7KZF4 910 aaKnown RBP eCLIP18.31■□□□□ 0.52
ITGB1-215ENST00000488494 FAM124AQ86V42 546 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 DHX40Q8IX18 779 aaKnown RBP18.31■□□□□ 0.52
ITGB1-215ENST00000488494 APCDD1Q8J025 514 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 SLC30A5Q8TAD4 765 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 NT5C3BQ969T7 300 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 PGAP3Q96FM1 320 aaPredicted RBP18.31■□□□□ 0.52
ITGB1-215ENST00000488494 C11orf70Q9BRQ4 267 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 GPR174Q9BXC1 333 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 TKTL2Q9H0I9 626 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 FBRSQ9HAH7 460 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 ANLNQ9NQW6 1124 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 ITM2CQ9NQX7 267 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 ERVW-1Q9UQF0 538 aa18.31■□□□□ 0.52
ITGB1-215ENST00000488494 CEP192Q8TEP8 1941 aa18.3■□□□□ 0.52
ITGB1-215ENST00000488494 MEI4A8MW99 385 aa18.3■□□□□ 0.52
ITGB1-215ENST00000488494 I6L893 689 aaPredicted RBP18.3■□□□□ 0.52
ITGB1-215ENST00000488494 IGLV3-19P01714 112 aa18.3■□□□□ 0.52
ITGB1-215ENST00000488494 MMP8P22894 467 aa18.3■□□□□ 0.52
ITGB1-215ENST00000488494 ECT2LQ008S8 904 aa18.3■□□□□ 0.52
ITGB1-215ENST00000488494 PPM1JQ5JR12 505 aa18.3■□□□□ 0.52
ITGB1-215ENST00000488494 RNF219Q5W0B1 726 aaPredicted RBP18.3■□□□□ 0.52
ITGB1-215ENST00000488494 C14orf80Q86SX3 495 aa18.3■□□□□ 0.52
ITGB1-215ENST00000488494 CFAP57Q96MR6 1250 aa18.3■□□□□ 0.52
ITGB1-215ENST00000488494 NUSAP1Q9BXS6 441 aaKnown RBP18.3■□□□□ 0.52
ITGB1-215ENST00000488494 SIK2Q9H0K1 926 aa18.3■□□□□ 0.52
ITGB1-215ENST00000488494 FSCN3Q9NQT6 498 aa18.3■□□□□ 0.52
ITGB1-215ENST00000488494 ARHGEF38Q9NXL2 777 aa18.3■□□□□ 0.52
ITGB1-215ENST00000488494 WSB2Q9NYS7 404 aaPredicted RBP18.3■□□□□ 0.52
ITGB1-215ENST00000488494 TMEM59LQ9UK28 342 aa18.3■□□□□ 0.52
ITGB1-215ENST00000488494 SNX10Q9Y5X0 201 aa18.3■□□□□ 0.52
ITGB1-215ENST00000488494 NYNRINQ9P2P1 1898 aaKnown RBP18.3■□□□□ 0.52
ITGB1-215ENST00000488494 C4orf47A7E2U8 309 aa18.29■□□□□ 0.52
ITGB1-215ENST00000488494 SIN3BO75182 1162 aa18.29■□□□□ 0.52
ITGB1-215ENST00000488494 F9P00740 461 aa18.29■□□□□ 0.52
ITGB1-215ENST00000488494 SRPRAP08240 638 aaKnown RBP18.29■□□□□ 0.52
ITGB1-215ENST00000488494 MZF1P28698 734 aaPredicted RBP18.29■□□□□ 0.52
ITGB1-215ENST00000488494 OXTRP30559 389 aa18.29■□□□□ 0.52
ITGB1-215ENST00000488494 RDXP35241 583 aaKnown RBP18.29■□□□□ 0.52
ITGB1-215ENST00000488494 MAPK8P45983 427 aa18.29■□□□□ 0.52
ITGB1-215ENST00000488494 STK19P49842 368 aaPredicted RBP18.29■□□□□ 0.52
ITGB1-215ENST00000488494 RPS14P62263 151 aaKnown RBP18.29■□□□□ 0.52
ITGB1-215ENST00000488494 HNRNPA1L2Q32P51 320 aaKnown RBP18.29■□□□□ 0.52
ITGB1-215ENST00000488494 ZNF776Q68DI1 518 aaPredicted RBP18.29■□□□□ 0.52
ITGB1-215ENST00000488494 PHLDB2Q86SQ0 1253 aa18.29■□□□□ 0.52
ITGB1-215ENST00000488494 EMC1Q8N766 993 aa18.29■□□□□ 0.52
ITGB1-215ENST00000488494 FOXJ1Q92949 421 aa18.29■□□□□ 0.52
ITGB1-215ENST00000488494 ZNF419Q96HQ0 510 aaPredicted RBP18.29■□□□□ 0.52
ITGB1-215ENST00000488494 PCDHB18PQ96TA0 734 aa18.29■□□□□ 0.52
ITGB1-215ENST00000488494 WDCPQ9H6R7 721 aa18.29■□□□□ 0.52
ITGB1-215ENST00000488494 TMEM9BQ9NQ34 198 aa18.29■□□□□ 0.52
ITGB1-215ENST00000488494 TMPRSS4Q9NRS4 437 aa18.29■□□□□ 0.52
ITGB1-215ENST00000488494 SEPT11Q9NVA2 429 aaKnown RBP18.29■□□□□ 0.52
ITGB1-215ENST00000488494 SUN2Q9UH99 717 aa18.29■□□□□ 0.52
ITGB1-215ENST00000488494 PAXBP1Q9Y5B6 917 aa18.29■□□□□ 0.52
ITGB1-215ENST00000488494 ITIH6Q6UXX5 1313 aa18.28■□□□□ 0.52
ITGB1-215ENST00000488494 TTC34A8MYJ7 566 aa18.28■□□□□ 0.52
ITGB1-215ENST00000488494 ENGP17813 658 aa18.28■□□□□ 0.52
ITGB1-215ENST00000488494 NSFP46459 744 aaKnown RBP18.28■□□□□ 0.52
ITGB1-215ENST00000488494 ZNF165P49910 485 aa18.28■□□□□ 0.52
ITGB1-215ENST00000488494 SLC12A1Q13621 1099 aa18.28■□□□□ 0.52
ITGB1-215ENST00000488494 DUOXA1Q1HG43 343 aa18.28■□□□□ 0.52
ITGB1-215ENST00000488494 CLEC16AQ2KHT3 1053 aa18.28■□□□□ 0.52
ITGB1-215ENST00000488494 TTC31Q49AM3 519 aaPredicted RBP18.28■□□□□ 0.52
ITGB1-215ENST00000488494 SYCP2LQ5T4T6 812 aa18.28■□□□□ 0.52
ITGB1-215ENST00000488494 SLC23A3Q6PIS1 610 aa18.28■□□□□ 0.52
ITGB1-215ENST00000488494 RABEPKQ7Z6M1 372 aa18.28■□□□□ 0.52
ITGB1-215ENST00000488494 RGL4Q8IZJ4 473 aa18.28■□□□□ 0.52
ITGB1-215ENST00000488494 KDM1BQ8NB78 822 aa18.28■□□□□ 0.52
ITGB1-215ENST00000488494 OR52K2Q8NGK3 314 aa18.28■□□□□ 0.52
ITGB1-215ENST00000488494 CEP76Q8TAP6 659 aa18.28■□□□□ 0.52
ITGB1-215ENST00000488494 RPL10LQ96L21 214 aaKnown RBP18.28■□□□□ 0.52
ITGB1-215ENST00000488494 NUP58Q9BVL2 599 aa18.28■□□□□ 0.52
ITGB1-215ENST00000488494 RSPH9Q9H1X1 276 aaPredicted RBP18.28■□□□□ 0.52
ITGB1-215ENST00000488494 SPTBN2O15020 2390 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.27■□□□□ 0.52
ITGB1-215ENST00000488494 SMTNL1A8MU46 457 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 TEX33O43247 280 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 CLDN11O75508 207 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 GJB6O95452 261 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 DNTTP04053 509 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 UNGP13051 313 aaPredicted RBP18.27■□□□□ 0.52
ITGB1-215ENST00000488494 OXCT1P55809 520 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 ATP11AP98196 1134 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 ZBTB16Q05516 673 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 ZNF177Q13360 481 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms