RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 PLK2Q9NYY3 685 aa10.62□□□□□ -0.71
SKA1-204ENST00000488454 MARK1Q9P0L2 795 aa10.62□□□□□ -0.71
SKA1-204ENST00000488454 WNT16Q9UBV4 365 aa10.62□□□□□ -0.71
SKA1-204ENST00000488454 HYOU1Q9Y4L1 999 aa10.62□□□□□ -0.71
SKA1-204ENST00000488454 SNX10Q9Y5X0 201 aa10.62□□□□□ -0.71
SKA1-204ENST00000488454 C5orf42Q9H799 3197 aa10.62□□□□□ -0.71
SKA1-204ENST00000488454 DOCK8Q8NF50 2099 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.61□□□□□ -0.71
SKA1-204ENST00000488454 GRID2IPA4D2P6 1211 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 DRGXA6NNA5 263 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.61□□□□□ -0.71
SKA1-204ENST00000488454 H3BRJ5 948 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 EEF2KO00418 725 aaKnown RBP10.61□□□□□ -0.71
SKA1-204ENST00000488454 KIF5CO60282 957 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 ALADP13716 330 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 IL1R2P27930 398 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 EPHB2P29323 1055 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 HTR7P34969 479 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 GJA4P35212 333 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 ARL4AP40617 200 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 CDH4P55283 916 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 CDH6P55285 790 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 OXCT1P55809 520 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 TAS2R40P59535 323 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 TPI1P60174 286 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 RPS24P62847 133 aaKnown RBP10.61□□□□□ -0.71
SKA1-204ENST00000488454 NRG1Q02297 640 aaPredicted RBP10.61□□□□□ -0.71
SKA1-204ENST00000488454 SLC25A11Q02978 314 aaKnown RBP10.61□□□□□ -0.71
SKA1-204ENST00000488454 PRKCQQ04759 706 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 ZNF177Q13360 481 aaPredicted RBP10.61□□□□□ -0.71
SKA1-204ENST00000488454 PDK2Q15119 407 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 HS1BP3Q53T59 392 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 FYB2Q5VWT5 728 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 C14orf80Q86SX3 495 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 RALGPS2Q86X27 583 aaPredicted RBP10.61□□□□□ -0.71
SKA1-204ENST00000488454 PYROXD2Q8N2H3 581 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 CARNMT1Q8N4J0 409 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 TRIM58Q8NG06 486 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 TBC1D31Q96DN5 1066 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 PEBP4Q96S96 227 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 MAK16Q9BXY0 300 aaKnown RBP10.61□□□□□ -0.71
SKA1-204ENST00000488454 SLC2A11Q9BYW1 496 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 ZYG11BQ9C0D3 744 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 RETREG1Q9H6L5 497 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 CATSPERBQ9H7T0 1116 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 HEBP1Q9NRV9 189 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.61□□□□□ -0.71
SKA1-204ENST00000488454 DEC1Q9P2X7 70 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 PPARGC1AQ9UBK2 798 aaKnown RBP10.61□□□□□ -0.71
SKA1-204ENST00000488454 CA14Q9ULX7 337 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 PYCARDQ9ULZ3 195 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 PIAS3Q9Y6X2 628 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 OBSL1O75147 1896 aa10.61□□□□□ -0.71
SKA1-204ENST00000488454 DENND4CQ5VZ89 1909 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 A0A1B0GVM2 712 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 CCDC66A2RUB6 948 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 TCAF2A6NFQ2 919 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 OTOL1A6NHN0 477 aaPredicted RBP10.6□□□□□ -0.71
SKA1-204ENST00000488454 SPECC1L-ADORA2AF8WAN1 911 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 I6L893 689 aaPredicted RBP10.6□□□□□ -0.71
SKA1-204ENST00000488454 GFRA2O00451 464 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 PSTPIP1O43586 416 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 DCXO43602 365 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 CLDN11O75508 207 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 LRIG2O94898 1065 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 PENKP01210 267 aaPredicted RBP10.6□□□□□ -0.71
SKA1-204ENST00000488454 TCF4P15884 667 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 CETN2P41208 172 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 ZXDAP98168 799 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 GRSF1Q12849 480 aaKnown RBP eCLIP10.6□□□□□ -0.71
SKA1-204ENST00000488454 CDH18Q13634 790 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 MLF2Q15773 248 aaPredicted RBP10.6□□□□□ -0.71
SKA1-204ENST00000488454 DPYSL2Q16555 572 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 CA9Q16790 459 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 ZNF852Q6ZMS4 543 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 CPNE8Q86YQ8 564 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 MFN1Q8IWA4 741 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 REXO1L1PQ8IX06 675 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 CCAR2Q8N163 923 aaKnown RBP10.6□□□□□ -0.71
SKA1-204ENST00000488454 UBL4BQ8N7F7 174 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 LRRC57Q8N9N7 239 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 FAM3CQ92520 227 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 CD101Q93033 1021 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 IGSF8Q969P0 613 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 PRICKLE1Q96MT3 831 aaPredicted RBP10.6□□□□□ -0.71
SKA1-204ENST00000488454 PNKPQ96T60 521 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 P2RY13Q9BPV8 354 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 CALN1Q9BXU9 219 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 MAGEB5Q9BZ81 275 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 GOLPH3Q9H4A6 298 aa10.6□□□□□ -0.71
SKA1-204ENST00000488454 DNAJC17Q9NVM6 304 aaKnown RBP10.6□□□□□ -0.71
SKA1-204ENST00000488454 KIAA1522Q9P206 1035 aaPredicted RBP10.6□□□□□ -0.71
SKA1-204ENST00000488454 MRPS17Q9Y2R5 130 aaKnown RBP10.6□□□□□ -0.71
SKA1-204ENST00000488454 NUP210Q8TEM1 1887 aaPredicted RBP10.59□□□□□ -0.71
SKA1-204ENST00000488454 TCF20Q9UGU0 1960 aaKnown RBP10.59□□□□□ -0.71
SKA1-204ENST00000488454 IGLV3-10A0A075B6K4 115 aa10.59□□□□□ -0.71
SKA1-204ENST00000488454 LRRD1A4D1F6 860 aa10.59□□□□□ -0.71
SKA1-204ENST00000488454 TBC1D3BA6NDS4 549 aa10.59□□□□□ -0.71
SKA1-204ENST00000488454 MIF4GDA9UHW6 222 aaKnown RBP10.59□□□□□ -0.71
SKA1-204ENST00000488454 FAM72CH0Y354 149 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms