RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 PPP1R12AO14974 1030 aaPredicted RBP13.09□□□□□ -0.31
NELFE-209ENST00000488426 NCAM2O15394 837 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 KCNN4O15554 427 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 MSI1O43347 362 aaKnown RBP13.09□□□□□ -0.31
NELFE-209ENST00000488426 MFSD11O43934 449 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 OPA1O60313 960 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 SEC24AO95486 1093 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 CSH1P0DML2 217 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 CSH2P0DML3 217 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 ERCC2P18074 760 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 RBL1P28749 1068 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 SERPINB6P35237 376 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 GGCXP38435 758 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 MTA1Q13330 715 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 PDK1Q15118 436 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 TRIP4Q15650 581 aaPredicted RBP13.09□□□□□ -0.31
NELFE-209ENST00000488426 SNX30Q5VWJ9 437 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 TRMT10CQ7L0Y3 403 aaKnown RBP13.09□□□□□ -0.31
NELFE-209ENST00000488426 TADA2BQ86TJ2 420 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 RELL1Q8IUW5 271 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 PPIL6Q8IXY8 311 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 TFB1MQ8WVM0 346 aaKnown RBP13.09□□□□□ -0.31
NELFE-209ENST00000488426 FERMT1Q9BQL6 677 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 EMILIN2Q9BXX0 1053 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 PHACTR1Q9C0D0 580 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 FARP1Q9Y4F1 1045 aaPredicted RBP13.09□□□□□ -0.31
NELFE-209ENST00000488426 YIPF1Q9Y548 306 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 ZDBF2Q9HCK1 2354 aa13.09□□□□□ -0.31
NELFE-209ENST00000488426 TGM5O43548 720 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 PAGE1O75459 146 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 LRIG2O94898 1065 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 APOEP02649 317 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 SRGAP2BP0DMP2 458 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 HOXC13P31276 330 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 ALDH1A3P47895 512 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 KPNA1P52294 538 aaPredicted RBP13.08□□□□□ -0.32
NELFE-209ENST00000488426 TBX4P57082 545 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 VEPH1Q14D04 833 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 ACBD5Q5T8D3 534 aaPredicted RBP13.08□□□□□ -0.32
NELFE-209ENST00000488426 MANEALQ5VSG8 457 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 LILRA6Q6PI73 481 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 TRMT2BQ96GJ1 504 aaKnown RBP13.08□□□□□ -0.32
NELFE-209ENST00000488426 FCRL2Q96LA5 508 aaPredicted RBP13.08□□□□□ -0.32
NELFE-209ENST00000488426 MYRFLQ96LU7 910 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 SH3GL2Q99962 352 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 BRD8Q9H0E9 1235 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 CYP4F11Q9HBI6 524 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 MAN1C1Q9NR34 630 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 MARCH2Q9P0N8 246 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 NUDT5Q9UKK9 219 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 PLAAQ9Y263 795 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 MFHAS1Q9Y4C4 1052 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 DMDP11532 3685 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 H3BQF6 201 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 FGF10O15520 208 aaPredicted RBP13.08□□□□□ -0.32
NELFE-209ENST00000488426 GCATO75600 419 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 SYF2O95926 243 aaKnown RBP13.08□□□□□ -0.32
NELFE-209ENST00000488426 NUDT17P0C025 328 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 ALADP13716 330 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 EPHB2P29323 1055 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 OAS2P29728 719 aaKnown RBP13.08□□□□□ -0.32
NELFE-209ENST00000488426 ELF1P32519 619 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 EIF3BP55884 814 aaKnown RBP13.08□□□□□ -0.32
NELFE-209ENST00000488426 FAM193AP78312 1265 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 RING1Q06587 406 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 EFEMP1Q12805 493 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 PRKD1Q15139 912 aaPredicted RBP13.08□□□□□ -0.32
NELFE-209ENST00000488426 C10orf120Q5SQS8 335 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 HEATR6Q6AI08 1181 aaKnown RBP13.08□□□□□ -0.32
NELFE-209ENST00000488426 CES5AQ6NT32 575 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 GPR149Q86SP6 731 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 CCDC25Q86WR0 208 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 TCEAL8Q8IYN2 117 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 GOLGA6L1Q8N7Z2 621 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 PRCCQ92733 491 aaPredicted RBP13.08□□□□□ -0.32
NELFE-209ENST00000488426 C1orf74Q96LT6 269 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 SLC12A6Q9UHW9 1150 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 MAGED2Q9UNF1 606 aaPredicted RBP13.08□□□□□ -0.32
NELFE-209ENST00000488426 NEU3Q9UQ49 428 aa13.08□□□□□ -0.32
NELFE-209ENST00000488426 CCDC195A0A1B0GUA6 201 aa13.07□□□□□ -0.32
NELFE-209ENST00000488426 C5orf60A6NFR6 353 aa13.07□□□□□ -0.32
NELFE-209ENST00000488426 TLR5O60602 858 aa13.07□□□□□ -0.32
NELFE-209ENST00000488426 MAP3K6O95382 1288 aa13.07□□□□□ -0.32
NELFE-209ENST00000488426 IGLV3-27P01718 113 aa13.07□□□□□ -0.32
NELFE-209ENST00000488426 ASGR2P07307 311 aa13.07□□□□□ -0.32
NELFE-209ENST00000488426 MX2P20592 715 aa13.07□□□□□ -0.32
NELFE-209ENST00000488426 CHKAP35790 457 aa13.07□□□□□ -0.32
NELFE-209ENST00000488426 PPP3CCP48454 512 aa13.07□□□□□ -0.32
NELFE-209ENST00000488426 ATAT1Q5SQI0 421 aa13.07□□□□□ -0.32
NELFE-209ENST00000488426 DENND2CQ68D51 928 aa13.07□□□□□ -0.32
NELFE-209ENST00000488426 ATP6V0D2Q8N8Y2 350 aa13.07□□□□□ -0.32
NELFE-209ENST00000488426 NAT8LQ8N9F0 302 aa13.07□□□□□ -0.32
NELFE-209ENST00000488426 ST13P5Q8NFI4 369 aaPredicted RBP13.07□□□□□ -0.32
NELFE-209ENST00000488426 CPT1BQ92523 772 aa13.07□□□□□ -0.32
NELFE-209ENST00000488426 ZNF707Q96C28 371 aaPredicted RBP13.07□□□□□ -0.32
NELFE-209ENST00000488426 TBC1D31Q96DN5 1066 aa13.07□□□□□ -0.32
NELFE-209ENST00000488426 EPB41L4BQ9H329 900 aa13.07□□□□□ -0.32
NELFE-209ENST00000488426 CATSPERBQ9H7T0 1116 aa13.07□□□□□ -0.32
NELFE-209ENST00000488426 SNX10Q9Y5X0 201 aa13.07□□□□□ -0.32
NELFE-209ENST00000488426 NFS1Q9Y697 457 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms