RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 LRRC45Q96CN5 670 aa7.11□□□□□ -1.27
PDAP1-203ENST00000488214 TCEAL4Q96EI5 215 aa7.11□□□□□ -1.27
PDAP1-203ENST00000488214 ZFRQ96KR1 1074 aaKnown RBP7.11□□□□□ -1.27
PDAP1-203ENST00000488214 PRICKLE1Q96MT3 831 aaPredicted RBP7.11□□□□□ -1.27
PDAP1-203ENST00000488214 CYP2S1Q96SQ9 504 aa7.11□□□□□ -1.27
PDAP1-203ENST00000488214 PRMT1Q99873 361 aaKnown RBP7.11□□□□□ -1.27
PDAP1-203ENST00000488214 FERMT1Q9BQL6 677 aa7.11□□□□□ -1.27
PDAP1-203ENST00000488214 KLF16Q9BXK1 252 aaPredicted RBP7.11□□□□□ -1.27
PDAP1-203ENST00000488214 LRRC3Q9BY71 257 aa7.11□□□□□ -1.27
PDAP1-203ENST00000488214 CEP41Q9BYV8 373 aa7.11□□□□□ -1.27
PDAP1-203ENST00000488214 RNF38Q9H0F5 515 aa7.11□□□□□ -1.27
PDAP1-203ENST00000488214 SMG9Q9H0W8 520 aaKnown RBP7.11□□□□□ -1.27
PDAP1-203ENST00000488214 PRDM12Q9H4Q4 367 aa7.11□□□□□ -1.27
PDAP1-203ENST00000488214 PIDD1Q9HB75 910 aa7.11□□□□□ -1.27
PDAP1-203ENST00000488214 GKN1Q9NS71 199 aa7.11□□□□□ -1.27
PDAP1-203ENST00000488214 ZDHHC18Q9NUE0 388 aa7.11□□□□□ -1.27
PDAP1-203ENST00000488214 ZNF446Q9NWS9 450 aa7.11□□□□□ -1.27
PDAP1-203ENST00000488214 ZDHHC7Q9NXF8 308 aa7.11□□□□□ -1.27
PDAP1-203ENST00000488214 PAK5Q9P286 719 aa7.11□□□□□ -1.27
PDAP1-203ENST00000488214 DNMT3BQ9UBC3 853 aaKnown RBP7.11□□□□□ -1.27
PDAP1-203ENST00000488214 FAM153AQ9UHL3 310 aa7.11□□□□□ -1.27
PDAP1-203ENST00000488214 DPP7Q9UHL4 492 aa7.11□□□□□ -1.27
PDAP1-203ENST00000488214 ANAPC5Q9UJX4 755 aa7.11□□□□□ -1.27
PDAP1-203ENST00000488214 LSM7Q9UK45 103 aaKnown RBP7.11□□□□□ -1.27
PDAP1-203ENST00000488214 SH3BP1Q9Y3L3 701 aa7.11□□□□□ -1.27
PDAP1-203ENST00000488214 RAD54BQ9Y620 910 aa7.11□□□□□ -1.27
PDAP1-203ENST00000488214 COL4A3Q01955 1670 aa7.11□□□□□ -1.27
PDAP1-203ENST00000488214 CHD9Q3L8U1 2897 aa7.11□□□□□ -1.27
PDAP1-203ENST00000488214 IGLV3-10A0A075B6K4 115 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 A0A0A0MRY4 1105 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 TYW5A2RUC4 315 aaKnown RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 KCNK1O00180 336 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 RFXAPO00287 272 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 TRDMT1O14717 391 aaKnown RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 NDC80O14777 642 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 NCAM2O15394 837 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 TSPAN3O60637 253 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 CNTN5O94779 1100 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 C1RP00736 705 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 KLKB1P03952 638 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 CEBPBP17676 345 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 PTPN2P17706 415 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 HDCP19113 662 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 DDX6P26196 483 aaKnown RBP eCLIP7.1□□□□□ -1.273e-8■■■■□ 19.4
PDAP1-203ENST00000488214 RPL22P35268 128 aaKnown RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 AVPR1AP37288 418 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 GARSP41250 739 aaKnown RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 NUMBP49757 651 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 SGSHP51688 502 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 EPHA5P54756 1037 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 DRG2P55039 364 aaKnown RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 MLLT6P55198 1093 aaPredicted RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 SLC7A9P82251 487 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 CAV1Q03135 178 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 PPIDQ08752 370 aaKnown RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 GALNT2Q10471 571 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 CASP8Q14790 479 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 SLC5A9Q2M3M2 681 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 FAM133BQ5BKY9 247 aaKnown RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 ACBD5Q5T8D3 534 aaPredicted RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 FAXCQ5TGI0 409 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 ARHGAP36Q6ZRI8 547 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 RTL10Q7L3V2 364 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 TMC3Q7Z5M5 1100 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 GRASPQ7Z6J2 395 aaPredicted RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 NLRP14Q86W24 1093 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 CCDC13Q8IYE1 715 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 ZNF683Q8IZ20 524 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 CFAP52Q8N1V2 620 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 C12orf76Q8N812 135 aaPredicted RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 EIF1ADQ8N9N8 165 aaKnown RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 LEMD2Q8NC56 503 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 HJURPQ8NCD3 748 aaPredicted RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 USP33Q8TEY7 942 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 SMG7Q92540 1137 aaKnown RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 PRCCQ92733 491 aaPredicted RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 ART4Q93070 314 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 CAVIN3Q969G5 261 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 PPP2R3CQ969Q6 453 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 ZBTB9Q96C00 473 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 ZNF707Q96C28 371 aaPredicted RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 HDAC11Q96DB2 347 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 RTP4Q96DX8 246 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 MYEOVQ96EZ4 313 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 HMCESQ96FZ2 354 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 P2RY11Q96G91 374 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 C1orf74Q96LT6 269 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 SPATA13Q96N96 652 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 DDX50Q9BQ39 737 aaKnown RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 APOL5Q9BWW9 433 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 PRKD2Q9BZL6 878 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 FAM129AQ9BZQ8 928 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 KLC2Q9H0B6 622 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 IGFLR1Q9H665 355 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 SFXN1Q9H9B4 322 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 NDFIP2Q9NV92 336 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 DNAJC17Q9NVM6 304 aaKnown RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 DZANK1Q9NVP4 752 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 TMEM248Q9NWD8 314 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms