RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 RTKNQ9BST9 563 aa24.47■■□□□ 1.51
RNF38-208ENST00000488058 PRSS16Q9NQE7 514 aa24.47■■□□□ 1.51
RNF38-208ENST00000488058 ANLNQ9NQW6 1124 aa24.47■■□□□ 1.51
RNF38-208ENST00000488058 ARHGEF38Q9NXL2 777 aa24.47■■□□□ 1.51
RNF38-208ENST00000488058 SUN2Q9UH99 717 aa24.47■■□□□ 1.51
RNF38-208ENST00000488058 ERVW-1Q9UQF0 538 aa24.47■■□□□ 1.51
RNF38-208ENST00000488058 SNX10Q9Y5X0 201 aa24.47■■□□□ 1.51
RNF38-208ENST00000488058 SPTBN4Q9H254 2564 aa24.46■■□□□ 1.51
RNF38-208ENST00000488058 KHNYNO15037 678 aaKnown RBP24.46■■□□□ 1.51
RNF38-208ENST00000488058 GJB6O95452 261 aa24.46■■□□□ 1.51
RNF38-208ENST00000488058 SERPINC1P01008 464 aa24.46■■□□□ 1.51
RNF38-208ENST00000488058 UNGP13051 313 aaPredicted RBP24.46■■□□□ 1.51
RNF38-208ENST00000488058 FERP16591 822 aa24.46■■□□□ 1.51
RNF38-208ENST00000488058 PTMSP20962 102 aa24.46■■□□□ 1.51
RNF38-208ENST00000488058 ITPKAP23677 461 aa24.46■■□□□ 1.51
RNF38-208ENST00000488058 CD6P30203 668 aa24.46■■□□□ 1.51
RNF38-208ENST00000488058 TPM4P67936 248 aa24.46■■□□□ 1.51
RNF38-208ENST00000488058 ATP11AP98196 1134 aa24.46■■□□□ 1.51
RNF38-208ENST00000488058 CLEC16AQ2KHT3 1053 aa24.46■■□□□ 1.51
RNF38-208ENST00000488058 PLEKHG6Q3KR16 790 aa24.46■■□□□ 1.51
RNF38-208ENST00000488058 SPDYCQ5MJ68 293 aa24.46■■□□□ 1.51
RNF38-208ENST00000488058 HSPA12BQ96MM6 686 aa24.46■■□□□ 1.51
RNF38-208ENST00000488058 AGPAT1Q99943 283 aa24.46■■□□□ 1.51
RNF38-208ENST00000488058 EDEM2Q9BV94 578 aa24.46■■□□□ 1.51
RNF38-208ENST00000488058 ITM2CQ9NQX7 267 aa24.46■■□□□ 1.51
RNF38-208ENST00000488058 TMPRSS4Q9NRS4 437 aa24.46■■□□□ 1.51
RNF38-208ENST00000488058 ADAM22Q9P0K1 906 aa24.46■■□□□ 1.51
RNF38-208ENST00000488058 USP36Q9P275 1121 aaKnown RBP24.46■■□□□ 1.51
RNF38-208ENST00000488058 WDR87Q6ZQQ6 2873 aa24.46■■□□□ 1.51
RNF38-208ENST00000488058 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.45■■□□□ 1.5
RNF38-208ENST00000488058 DCDC2BA2VCK2 349 aa24.45■■□□□ 1.5
RNF38-208ENST00000488058 SLC30A4O14863 429 aa24.45■■□□□ 1.5
RNF38-208ENST00000488058 CCDC172P0C7W6 258 aa24.45■■□□□ 1.5
RNF38-208ENST00000488058 MZF1P28698 734 aaPredicted RBP24.45■■□□□ 1.5
RNF38-208ENST00000488058 RDXP35241 583 aaKnown RBP24.45■■□□□ 1.5
RNF38-208ENST00000488058 TPMTP51580 245 aa24.45■■□□□ 1.5
RNF38-208ENST00000488058 ZNF177Q13360 481 aaPredicted RBP24.45■■□□□ 1.5
RNF38-208ENST00000488058 CDO1Q16878 200 aa24.45■■□□□ 1.5
RNF38-208ENST00000488058 METTL3Q86U44 580 aaKnown RBP24.45■■□□□ 1.5
RNF38-208ENST00000488058 FAM124AQ86V42 546 aa24.45■■□□□ 1.5
RNF38-208ENST00000488058 FAM131BQ86XD5 332 aa24.45■■□□□ 1.5
RNF38-208ENST00000488058 SYT12Q8IV01 421 aa24.45■■□□□ 1.5
RNF38-208ENST00000488058 TOE1Q96GM8 510 aaKnown RBP24.45■■□□□ 1.5
RNF38-208ENST00000488058 MRGPRX3Q96LB0 322 aa24.45■■□□□ 1.5
RNF38-208ENST00000488058 CBX8Q9HC52 389 aa24.45■■□□□ 1.5
RNF38-208ENST00000488058 TMEM74BQ9NUR3 256 aa24.45■■□□□ 1.5
RNF38-208ENST00000488058 ECT2LQ008S8 904 aa24.44■■□□□ 1.5
RNF38-208ENST00000488058 SLC12A1Q13621 1099 aa24.44■■□□□ 1.5
RNF38-208ENST00000488058 TRIM61Q5EBN2 209 aa24.44■■□□□ 1.5
RNF38-208ENST00000488058 IL31Q6EBC2 164 aa24.44■■□□□ 1.5
RNF38-208ENST00000488058 CXorf57Q6NSI4 855 aaKnown RBP24.44■■□□□ 1.5
RNF38-208ENST00000488058 ERMP1Q7Z2K6 904 aa24.44■■□□□ 1.5
RNF38-208ENST00000488058 LUZP1Q86V48 1076 aa24.44■■□□□ 1.5
RNF38-208ENST00000488058 SLC41A1Q8IVJ1 513 aa24.44■■□□□ 1.5
RNF38-208ENST00000488058 RGL4Q8IZJ4 473 aa24.44■■□□□ 1.5
RNF38-208ENST00000488058 JOSD2Q8TAC2 188 aa24.44■■□□□ 1.5
RNF38-208ENST00000488058 RXFP2Q8WXD0 754 aa24.44■■□□□ 1.5
RNF38-208ENST00000488058 MYO19Q96H55 970 aa24.44■■□□□ 1.5
RNF38-208ENST00000488058 RPL10LQ96L21 214 aaKnown RBP24.44■■□□□ 1.5
RNF38-208ENST00000488058 NAP1L5Q96NT1 182 aaPredicted RBP24.44■■□□□ 1.5
RNF38-208ENST00000488058 SELENOOQ9BVL4 669 aa24.44■■□□□ 1.5
RNF38-208ENST00000488058 GPR174Q9BXC1 333 aa24.44■■□□□ 1.5
RNF38-208ENST00000488058 I6L893 689 aaPredicted RBP24.43■■□□□ 1.5
RNF38-208ENST00000488058 CFIP05156 583 aa24.43■■□□□ 1.5
RNF38-208ENST00000488058 CALB1P05937 261 aa24.43■■□□□ 1.5
RNF38-208ENST00000488058 SRPRAP08240 638 aaKnown RBP24.43■■□□□ 1.5
RNF38-208ENST00000488058 SDC4P31431 198 aa24.43■■□□□ 1.5
RNF38-208ENST00000488058 DPP6P42658 865 aa24.43■■□□□ 1.5
RNF38-208ENST00000488058 OXCT1P55809 520 aa24.43■■□□□ 1.5
RNF38-208ENST00000488058 C15orf59Q2T9L4 293 aaPredicted RBP24.43■■□□□ 1.5
RNF38-208ENST00000488058 STPG1Q5TH74 334 aa24.43■■□□□ 1.5
RNF38-208ENST00000488058 LRRC31Q6UY01 552 aa24.43■■□□□ 1.5
RNF38-208ENST00000488058 ARCQ7LC44 396 aa24.43■■□□□ 1.5
RNF38-208ENST00000488058 FBRSQ9HAH7 460 aa24.43■■□□□ 1.5
RNF38-208ENST00000488058 WSB2Q9NYS7 404 aaPredicted RBP24.43■■□□□ 1.5
RNF38-208ENST00000488058 PILRBQ9UKJ0 227 aa24.43■■□□□ 1.5
RNF38-208ENST00000488058 CEP250Q9BV73 2442 aa24.43■■□□□ 1.5
RNF38-208ENST00000488058 DMXL1Q9Y485 3027 aa24.42■■□□□ 1.5
RNF38-208ENST00000488058 A0A1B0GTH6 734 aa24.42■■□□□ 1.5
RNF38-208ENST00000488058 LNP1A1A4G5 178 aa24.42■■□□□ 1.5
RNF38-208ENST00000488058 LRRC53A6NM62 1247 aa24.42■■□□□ 1.5
RNF38-208ENST00000488058 MEI4A8MW99 385 aa24.42■■□□□ 1.5
RNF38-208ENST00000488058 TTC34A8MYJ7 566 aa24.42■■□□□ 1.5
RNF38-208ENST00000488058 SIN3BO75182 1162 aa24.42■■□□□ 1.5
RNF38-208ENST00000488058 CNTN5O94779 1100 aa24.42■■□□□ 1.5
RNF38-208ENST00000488058 DNTTP04053 509 aa24.42■■□□□ 1.5
RNF38-208ENST00000488058 KRT3P12035 628 aa24.42■■□□□ 1.5
RNF38-208ENST00000488058 KCNA4P22459 653 aa24.42■■□□□ 1.5
RNF38-208ENST00000488058 OXTRP30559 389 aa24.42■■□□□ 1.5
RNF38-208ENST00000488058 STK19P49842 368 aaPredicted RBP24.42■■□□□ 1.5
RNF38-208ENST00000488058 RPS14P62263 151 aaKnown RBP24.42■■□□□ 1.5
RNF38-208ENST00000488058 IRX4P78413 519 aa24.42■■□□□ 1.5
RNF38-208ENST00000488058 PTP4A2Q12974 167 aa24.42■■□□□ 1.5
RNF38-208ENST00000488058 ZNF776Q68DI1 518 aaPredicted RBP24.42■■□□□ 1.5
RNF38-208ENST00000488058 PHF13Q86YI8 300 aaPredicted RBP24.42■■□□□ 1.5
RNF38-208ENST00000488058 BAP1Q92560 729 aa24.42■■□□□ 1.5
RNF38-208ENST00000488058 NUSAP1Q9BXS6 441 aaKnown RBP24.42■■□□□ 1.5
RNF38-208ENST00000488058 TMEM51Q9NW97 253 aa24.42■■□□□ 1.5
RNF38-208ENST00000488058 SLCO3A1Q9UIG8 710 aa24.42■■□□□ 1.5
RNF38-208ENST00000488058 NYNRINQ9P2P1 1898 aaKnown RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms