RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-241	ENST00000487169	NPNT	Q6UXI9	565 aa		13.63	□□□□□ -0.23
HDLBP-241	ENST00000487169	TEX9	Q8N6V9	391 aa		13.63	□□□□□ -0.23
HDLBP-241	ENST00000487169	ZBTB10	Q96DT7	871 aa		13.63	□□□□□ -0.23
HDLBP-241	ENST00000487169	SPATA13	Q96N96	652 aa		13.63	□□□□□ -0.23
HDLBP-241	ENST00000487169	FGFBP2	Q9BYJ0	223 aa		13.63	□□□□□ -0.23
HDLBP-241	ENST00000487169	TM6SF2	Q9BZW4	377 aa		13.63	□□□□□ -0.23
HDLBP-241	ENST00000487169	TCF7L2	Q9NQB0	619 aa		13.63	□□□□□ -0.23
HDLBP-241	ENST00000487169	CCNT2	O60583	730 aa	Known RBP	13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	BAIAP3	O94812	1187 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	CYP1A2	P05177	515 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	CSH1	P0DML2	217 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	CSH2	P0DML3	217 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	DARS	P14868	501 aa	Known RBP	13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	PSMB4	P28070	264 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	SGCG	Q13326	291 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	SDHAF4	Q5VUM1	108 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	LRRC8B	Q6P9F7	803 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	THAP11	Q96EK4	314 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	TMEM120A	Q9BXJ8	343 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	SPACA6	W5XKT8	324 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	XRN1	Q8IZH2	1706 aa	Known RBP	13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	CLDN5	O00501	218 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	UBD	O15205	165 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	UBOX5	O94941	541 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	SERPINE1	P05121	402 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	ETS1	P14921	441 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	HNRNPH3	P31942	346 aa	Known RBP	13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	POLR2L	P62875	67 aa	Known RBP	13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	CHRNB3	Q05901	458 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	CYLC2	Q14093	348 aa	Predicted RBP	13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	SPANXN3	Q5MJ09	141 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	GRTP1	Q5TC63	336 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	BBS12	Q6ZW61	710 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	PHF13	Q86YI8	300 aa	Predicted RBP	13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	C12orf56	Q8IXR9	622 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	ZCCHC9	Q8N567	271 aa	Known RBP	13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	ZNF614	Q8N883	585 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	PRELID2	Q8N945	189 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	TDRD5	Q8NAT2	981 aa	Known RBP	13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	MYLPF	Q96A32	169 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	ZCCHC2	Q9C0B9	1178 aa	Known RBP	13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	EXOSC4	Q9NPD3	245 aa	Known RBP	13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	KNL1	Q8NG31	2342 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	PHGDH	O43175	533 aa	Known RBP	13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	ALB	P02768	609 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	PLOD1	Q02809	727 aa	Predicted RBP	13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	TUSC3	Q13454	348 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	ITGA7	Q13683	1181 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	CYP51A1	Q16850	503 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	BBS7	Q8IWZ6	715 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	OR52K1	Q8NGK4	314 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	METTL6	Q8TCB7	284 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	MFSD14A	Q96MC6	490 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	NRDE2	Q9H7Z3	1164 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	H2AFY2	Q9P0M6	372 aa	Predicted RBP	13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	FAM50B	Q9Y247	325 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	GIT1	Q9Y2X7	761 aa		13.62	□□□□□ -0.23
HDLBP-241	ENST00000487169	LTN1	O94822	1766 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	NR5A2	O00482	541 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	HNRNPR	O43390	633 aa	Known RBP	13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	KATNA1	O75449	491 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	MAPK1	P28482	360 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	SERPINH1	P50454	418 aa	Known RBP	13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	CCNG1	P51959	295 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	CRADD	P78560	199 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	CNTN1	Q12860	1018 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	MMRN1	Q13201	1228 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	PSTK	Q8IV42	348 aa	Known RBP	13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	HOMEZ	Q8IX15	550 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	GOLGA2P5	Q9HBQ8	144 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	ETNK2	Q9NVF9	386 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	MRC1	P22897	1456 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	RASSF10	A6NK89	507 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	FGF10	O15520	208 aa	Predicted RBP	13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	ADCY6	O43306	1168 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	PSMA4	P25789	261 aa	Known RBP	13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	SERPINA4	P29622	427 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	RPL22	P35268	128 aa	Known RBP	13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	NCALD	P61601	193 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	SMAD3	P84022	425 aa	Known RBP	13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	RCN1	Q15293	331 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	FOXR2	Q6PJQ5	311 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	BNC2	Q6ZN30	1099 aa	Predicted RBP	13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	CCDC149	Q6ZUS6	474 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	TNIP2	Q8NFZ5	429 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	MCOLN3	Q8TDD5	553 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	SUSD6	Q92537	303 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	VPS50	Q96JG6	964 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	TBL1Y	Q9BQ87	522 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	PTPRH	Q9HD43	1115 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	BCL9L	Q86UU0	1499 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	MAP3K13	O43283	966 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	CYP1A1	P04798	512 aa	Predicted RBP	13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	MPO	P05164	745 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	ERVK-10	P10266	1014 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	IGFBP4	P22692	258 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	CRABP2	P29373	138 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	CHKA	P35790	457 aa		13.61	□□□□□ -0.23
HDLBP-241	ENST00000487169	ITIH4	Q14624	930 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms