RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 ARHGEF4Q9NR80 690 aa7.05□□□□□ -1.28
SMC4-217ENST00000485867 ARHGAP28Q9P2N2 729 aa7.05□□□□□ -1.28
SMC4-217ENST00000485867 UXTQ9UBK9 157 aaPredicted RBP7.05□□□□□ -1.28
SMC4-217ENST00000485867 GGT7Q9UJ14 662 aa7.05□□□□□ -1.28
SMC4-217ENST00000485867 ARHGAP26Q9UNA1 814 aa7.05□□□□□ -1.28
SMC4-217ENST00000485867 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.05□□□□□ -1.28
SMC4-217ENST00000485867 KCTD3Q9Y597 815 aa7.05□□□□□ -1.28
SMC4-217ENST00000485867 UBR5O95071 2799 aaPredicted RBP7.05□□□□□ -1.28
SMC4-217ENST00000485867 SPTBN1Q01082 2364 aaKnown RBP7.04□□□□□ -1.28
SMC4-217ENST00000485867 A0A1W2PQF6 199 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 SSU72P8A0A1W2PR75 194 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 C2orf78A6NCI8 922 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 NDUFS2O75306 463 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 C6P13671 934 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 HOXB2P14652 356 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 HOXA5P20719 270 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 GRIA2P42262 883 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 IL12RB1P42701 662 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 NPTX2P47972 431 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 CSRP3P50461 194 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 PEX3P56589 373 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 EVCP57679 992 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 ZXDBP98169 803 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 RHDQ02161 417 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 KCNB1Q14721 858 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 RTP5Q14D33 572 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 DHCR24Q15392 516 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 HLA-BQ31612 363 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 PREPLQ4J6C6 727 aaPredicted RBP7.04□□□□□ -1.28
SMC4-217ENST00000485867 BLOC1S2Q6QNY1 142 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 IL27RAQ6UWB1 636 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 GK5Q6ZS86 529 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 HS2ST1Q7LGA3 356 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 TRMT11Q7Z4G4 463 aaKnown RBP7.04□□□□□ -1.28
SMC4-217ENST00000485867 FILIP1Q7Z7B0 1213 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 ZNF513Q8N8E2 541 aaPredicted RBP7.04□□□□□ -1.28
SMC4-217ENST00000485867 LRRC15Q8TF66 581 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 FCRL2Q96LA5 508 aaPredicted RBP7.04□□□□□ -1.28
SMC4-217ENST00000485867 C20orf173Q96LM9 149 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 JAKMIP1Q96N16 626 aaKnown RBP7.04□□□□□ -1.28
SMC4-217ENST00000485867 MTMR9Q96QG7 549 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 TMLHEQ9NVH6 421 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 NFE2L3Q9Y4A8 694 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 CKAP5Q14008 2032 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 TLN1Q9Y490 2541 aaKnown RBP7.04□□□□□ -1.28
SMC4-217ENST00000485867 DOPEY1Q5JWR5 2465 aa7.04□□□□□ -1.28
SMC4-217ENST00000485867 ANKRD17O75179 2603 aaKnown RBP7.03□□□□□ -1.28
SMC4-217ENST00000485867 NBASA2RRP1 2371 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 CCDC169A6NNP5 214 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 MEI4A8MW99 385 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 FADS2P1A8MWK0 482 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.03□□□□□ -1.28
SMC4-217ENST00000485867 BTBD18B2RXH4 712 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 LEFTY2O00292 366 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 TNFRSF10CO14798 259 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 CPLX1O14810 134 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 SCAMP3O14828 347 aaKnown RBP7.03□□□□□ -1.28
SMC4-217ENST00000485867 XPOTO43592 962 aaKnown RBP7.03□□□□□ -1.28
SMC4-217ENST00000485867 NEMFO60524 1076 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 TOM1L1O75674 476 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 CLTAP09496 248 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 NME1P15531 152 aaKnown RBP7.03□□□□□ -1.28
SMC4-217ENST00000485867 PNLIPP16233 465 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 RPS6KB1P23443 525 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 PAX3P23760 479 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 WASP42768 502 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 CLDN6P56747 220 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 YBX1P67809 324 aaKnown RBP7.03□□□□□ -1.28
SMC4-217ENST00000485867 SRSF3P84103 164 aaKnown RBP7.03□□□□□ -1.28
SMC4-217ENST00000485867 ATP2C1P98194 919 aaPredicted RBP7.03□□□□□ -1.28
SMC4-217ENST00000485867 MCL1Q07820 350 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 CCDC173Q0VFZ6 552 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 LY6DQ14210 128 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 SAFBQ15424 915 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMC4-217ENST00000485867 DDR2Q16832 855 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 ZNF385BQ569K4 471 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 COLEC12Q5KU26 742 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 SPATA1Q5VX52 437 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 RHBDF2Q6PJF5 856 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 MIB1Q86YT6 1006 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 ADGRG2Q8IZP9 1017 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 DAW1Q8N136 415 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 KIAA1958Q8N8K9 716 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 IPO4Q8TEX9 1081 aaKnown RBP7.03□□□□□ -1.28
SMC4-217ENST00000485867 GJB4Q9NTQ9 266 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 TNFRSF10DQ9UBN6 386 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 DSEQ9UL01 958 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 FLNCQ14315 2725 aa7.03□□□□□ -1.28
SMC4-217ENST00000485867 USP9YO00507 2555 aaPredicted RBP7.02□□□□□ -1.29
SMC4-217ENST00000485867 ANO9A1A5B4 782 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 LACTBL1A8MY62 500 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 PIRO00625 290 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 CYB561D2O14569 222 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 SLC9A3R1O14745 358 aaPredicted RBP7.02□□□□□ -1.29
SMC4-217ENST00000485867 BCAT2O15382 392 aaPredicted RBP7.02□□□□□ -1.29
SMC4-217ENST00000485867 JUPP14923 745 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 HDCP19113 662 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 RPA1P27694 616 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 CD6P30203 668 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 NTSR1P30989 418 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms