RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ITPKAP23677 461 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 MZF1P28698 734 aaPredicted RBP12.67□□□□□ -0.38
MSH5-216ENST00000484309 STK19P49842 368 aaPredicted RBP12.67□□□□□ -0.38
MSH5-216ENST00000484309 ARHGAP8P85298 464 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 PTP4A2Q12974 167 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 E2F5Q15329 346 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 C15orf59Q2T9L4 293 aaPredicted RBP12.67□□□□□ -0.38
MSH5-216ENST00000484309 PLEKHG6Q3KR16 790 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 SLC25A52Q3SY17 297 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 LYSMD4Q5XG99 296 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 TRIM72Q6ZMU5 477 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 FAM124AQ86V42 546 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 FAM131BQ86XD5 332 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 ZNF557Q8N988 423 aaPredicted RBP12.67□□□□□ -0.38
MSH5-216ENST00000484309 OR52K2Q8NGK3 314 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 OR2T3Q8NH03 318 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 RXFP2Q8WXD0 754 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 BAP1Q92560 729 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 PRCCQ92733 491 aaPredicted RBP12.67□□□□□ -0.38
MSH5-216ENST00000484309 NT5C3BQ969T7 300 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 TTC17Q96AE7 1141 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 SIPA1Q96FS4 1042 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 MYO19Q96H55 970 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 RPL10LQ96L21 214 aaKnown RBP12.67□□□□□ -0.38
MSH5-216ENST00000484309 MRGPRX3Q96LB0 322 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 PRSS16Q9NQE7 514 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 TMEM74BQ9NUR3 256 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 ARHGEF38Q9NXL2 777 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 ADAM22Q9P0K1 906 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 KIAA1522Q9P206 1035 aaPredicted RBP12.67□□□□□ -0.38
MSH5-216ENST00000484309 ERVW-1Q9UQF0 538 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 TMEM131Q92545 1883 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 CHD5Q8TDI0 1954 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 A0A1B0GTH6 734 aa12.66□□□□□ -0.38
MSH5-216ENST00000484309 DCDC2BA2VCK2 349 aa12.66□□□□□ -0.38
MSH5-216ENST00000484309 TTC34A8MYJ7 566 aa12.66□□□□□ -0.38
MSH5-216ENST00000484309 AP5Z1O43299 807 aa12.66□□□□□ -0.38
MSH5-216ENST00000484309 NDUFS2O75306 463 aa12.66□□□□□ -0.38
MSH5-216ENST00000484309 CNTN5O94779 1100 aa12.66□□□□□ -0.38
MSH5-216ENST00000484309 MOCS3O95396 460 aa12.66□□□□□ -0.38
MSH5-216ENST00000484309 FERP16591 822 aa12.66□□□□□ -0.38
MSH5-216ENST00000484309 ST8SIA6P61647 398 aa12.66□□□□□ -0.38
MSH5-216ENST00000484309 CAMK2GQ13555 558 aaPredicted RBP12.66□□□□□ -0.38
MSH5-216ENST00000484309 PUM1Q14671 1186 aaKnown RBP eCLIP12.66□□□□□ -0.38
MSH5-216ENST00000484309 ZSCAN23Q3MJ62 389 aa12.66□□□□□ -0.38
MSH5-216ENST00000484309 ALFQ53S48 1182 aa12.66□□□□□ -0.38
MSH5-216ENST00000484309 BRMS1LQ5PSV4 323 aa12.66□□□□□ -0.38
MSH5-216ENST00000484309 SH3PXD2AQ5TCZ1 1133 aa12.66□□□□□ -0.38
MSH5-216ENST00000484309 E4F1Q66K89 784 aaPredicted RBP12.66□□□□□ -0.38
MSH5-216ENST00000484309 CXorf57Q6NSI4 855 aaKnown RBP12.66□□□□□ -0.38
MSH5-216ENST00000484309 SLC36A4Q6YBV0 504 aa12.66□□□□□ -0.38
MSH5-216ENST00000484309 SLC41A1Q8IVJ1 513 aa12.66□□□□□ -0.38
MSH5-216ENST00000484309 NETO1Q8TDF5 533 aa12.66□□□□□ -0.38
MSH5-216ENST00000484309 TOE1Q96GM8 510 aaKnown RBP12.66□□□□□ -0.38
MSH5-216ENST00000484309 HSPA12BQ96MM6 686 aa12.66□□□□□ -0.38
MSH5-216ENST00000484309 DLL3Q9NYJ7 618 aa12.66□□□□□ -0.38
MSH5-216ENST00000484309 SLCO3A1Q9UIG8 710 aa12.66□□□□□ -0.38
MSH5-216ENST00000484309 PCDH15Q96QU1 1955 aa12.66□□□□□ -0.38
MSH5-216ENST00000484309 CACNA1AO00555 2505 aa12.66□□□□□ -0.38
MSH5-216ENST00000484309 CNOT1A5YKK6 2376 aaKnown RBP12.66□□□□□ -0.38
MSH5-216ENST00000484309 ASCC3Q8N3C0 2202 aaKnown RBP12.66□□□□□ -0.38
MSH5-216ENST00000484309 DCHS1Q96JQ0 3298 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 CACNA1EQ15878 2313 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 TMCO5BA8MYB1 307 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 SIN3BO75182 1162 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 F9P00740 461 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 ASLP04424 464 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 CALB1P05937 261 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 ACADMP11310 421 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 PTMSP20962 102 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 KCNA4P22459 653 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 CD6P30203 668 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 SDC4P31431 198 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 RDXP35241 583 aaKnown RBP12.65□□□□□ -0.38
MSH5-216ENST00000484309 TPMTP51580 245 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 FANCCQ00597 558 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 ZNF33AQ06730 810 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 ASIC2Q16515 512 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 CCDC14Q49A88 953 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 TTC39BQ5VTQ0 682 aaPredicted RBP12.65□□□□□ -0.38
MSH5-216ENST00000484309 RNF219Q5W0B1 726 aaPredicted RBP12.65□□□□□ -0.38
MSH5-216ENST00000484309 MON1BQ7L1V2 547 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 DGLUCYQ7Z3D6 616 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 IRF2BP2Q7Z5L9 587 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 DNAAF5Q86Y56 855 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 PHF13Q86YI8 300 aaPredicted RBP12.65□□□□□ -0.38
MSH5-216ENST00000484309 PGAP3Q96FM1 320 aaPredicted RBP12.65□□□□□ -0.38
MSH5-216ENST00000484309 EDEM2Q9BV94 578 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 SELENOOQ9BVL4 669 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 GPR174Q9BXC1 333 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 FSCN3Q9NQT6 498 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 ITM2CQ9NQX7 267 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 TAS2R14Q9NYV8 317 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 MPP6Q9NZW5 540 aa12.65□□□□□ -0.38
MSH5-216ENST00000484309 USP36Q9P275 1121 aaKnown RBP12.65□□□□□ -0.38
MSH5-216ENST00000484309 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.64□□□□□ -0.39
MSH5-216ENST00000484309 A0A1W2PQC6 194 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 LNP1A1A4G5 178 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 C2CD4BA6NLJ0 364 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 KHNYNO15037 678 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms