RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 MANEALQ5VSG8 457 aa20.51■□□□□ 0.87
TRAPPC12-220ENST00000482645 POLNQ7Z5Q5 900 aa20.51■□□□□ 0.87
TRAPPC12-220ENST00000482645 ETFBKMTQ8IXQ9 262 aa20.51■□□□□ 0.87
TRAPPC12-220ENST00000482645 WFDC5Q8TCV5 224 aa20.51■□□□□ 0.87
TRAPPC12-220ENST00000482645 FAM3CQ92520 227 aa20.51■□□□□ 0.87
TRAPPC12-220ENST00000482645 P2RY13Q9BPV8 354 aa20.51■□□□□ 0.87
TRAPPC12-220ENST00000482645 CALN1Q9BXU9 219 aa20.51■□□□□ 0.87
TRAPPC12-220ENST00000482645 SNX12Q9UMY4 172 aa20.51■□□□□ 0.87
TRAPPC12-220ENST00000482645 NDRG2Q9UN36 371 aaKnown RBP20.51■□□□□ 0.87
TRAPPC12-220ENST00000482645 IGLV3-10A0A075B6K4 115 aa20.5■□□□□ 0.87
TRAPPC12-220ENST00000482645 PI4K2BG5E9Z4 385 aa20.5■□□□□ 0.87
TRAPPC12-220ENST00000482645 LUC7L3O95232 432 aaKnown RBP20.5■□□□□ 0.87
TRAPPC12-220ENST00000482645 CD48P09326 243 aa20.5■□□□□ 0.87
TRAPPC12-220ENST00000482645 ALADP13716 330 aa20.5■□□□□ 0.87
TRAPPC12-220ENST00000482645 GLULP15104 373 aa20.5■□□□□ 0.87
TRAPPC12-220ENST00000482645 ARL4AP40617 200 aa20.5■□□□□ 0.87
TRAPPC12-220ENST00000482645 RWDD2BP57060 319 aa20.5■□□□□ 0.87
TRAPPC12-220ENST00000482645 PRKCQQ04759 706 aa20.5■□□□□ 0.87
TRAPPC12-220ENST00000482645 SIGLEC14Q08ET2 396 aa20.5■□□□□ 0.87
TRAPPC12-220ENST00000482645 MESP2Q0VG99 397 aa20.5■□□□□ 0.87
TRAPPC12-220ENST00000482645 SEMA3BQ13214 749 aa20.5■□□□□ 0.87
TRAPPC12-220ENST00000482645 LRRC38Q5VT99 294 aa20.5■□□□□ 0.87
TRAPPC12-220ENST00000482645 DCAF12L1Q5VU92 463 aa20.5■□□□□ 0.87
TRAPPC12-220ENST00000482645 GRAMD4Q6IC98 578 aa20.5■□□□□ 0.87
TRAPPC12-220ENST00000482645 ZNF852Q6ZMS4 543 aa20.5■□□□□ 0.87
TRAPPC12-220ENST00000482645 COL25A1Q9BXS0 654 aaPredicted RBP20.5■□□□□ 0.87
TRAPPC12-220ENST00000482645 PCDH18Q9HCL0 1135 aa20.5■□□□□ 0.87
TRAPPC12-220ENST00000482645 ARHGEF4Q9NR80 690 aa20.5■□□□□ 0.87
TRAPPC12-220ENST00000482645 PPARGC1AQ9UBK2 798 aaKnown RBP20.5■□□□□ 0.87
TRAPPC12-220ENST00000482645 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 LRRD1A4D1F6 860 aa20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 DRGXA6NNA5 263 aa20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 GALK1P51570 392 aa20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 CDH4P55283 916 aa20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 ZNF177Q13360 481 aaPredicted RBP20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 ZNF211Q13398 564 aaPredicted RBP20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 C5orf22Q49AR2 442 aa20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 ARTNQ5T4W7 220 aa20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 PAPD7Q5XG87 772 aaKnown RBP20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 RFX8Q6ZV50 586 aa20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 RAPGEF5Q92565 580 aa20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 SHDQ96IW2 340 aa20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 OSBPL9Q96SU4 736 aa20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 PNKPQ96T60 521 aa20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 MFSD1Q9H3U5 465 aa20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 FBRSL1Q9HCM7 1045 aaKnown RBP20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 RRAGDQ9NQL2 400 aaPredicted RBP20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 ABCB8Q9NUT2 735 aa20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 CWC15Q9P013 229 aaKnown RBP20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 NEU3Q9UQ49 428 aa20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 DOCK4Q8N1I0 1966 aa20.49■□□□□ 0.87
TRAPPC12-220ENST00000482645 H3BRJ5 948 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 MAN2B1O00754 1011 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 CLDN11O75508 207 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 OR1E1P30953 314 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 PEX5P50542 639 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 MMRN1Q13201 1228 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 UBXN2BQ14CS0 331 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 FSCBQ5H9T9 825 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 ASTLQ6HA08 431 aaPredicted RBP20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 CHST9Q7L1S5 443 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 CCDC50Q8IVM0 306 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 KATNAL2Q8IYT4 538 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 EXOC4Q96A65 974 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 RNF25Q96BH1 459 aaPredicted RBP20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 MSANTD3Q96H12 275 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 CATSPERBQ9H7T0 1116 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 DDX56Q9NY93 547 aaKnown RBP20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 SAR1BQ9Y6B6 198 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 KIAA1549LQ6ZVL6 1849 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 URI1O94763 535 aaPredicted RBP20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 RHOQP17081 205 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 HLA-FP30511 346 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 CD70P32970 193 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 EIF2DP41214 584 aaKnown RBP20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 DPYSL3Q14195 570 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 TRIM67Q6ZTA4 783 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 MAP7D3Q8IWC1 876 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 SFTPA1Q8IWL2 248 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 FLCNQ8NFG4 579 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 CSPG4P5Q96PW8 444 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 FOXQ1Q9C009 403 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 TBC1D17Q9HA65 648 aa20.48■□□□□ 0.87
TRAPPC12-220ENST00000482645 TBC1D3BA6NDS4 549 aa20.47■□□□□ 0.87
TRAPPC12-220ENST00000482645 SHISA7A6NL88 538 aa20.47■□□□□ 0.87
TRAPPC12-220ENST00000482645 TNFRSF10AO00220 468 aa20.47■□□□□ 0.87
TRAPPC12-220ENST00000482645 KAT7O95251 611 aa20.47■□□□□ 0.87
TRAPPC12-220ENST00000482645 APODP05090 189 aa20.47■□□□□ 0.87
TRAPPC12-220ENST00000482645 RHOCP08134 193 aa20.47■□□□□ 0.87
TRAPPC12-220ENST00000482645 TCP1P17987 556 aaKnown RBP20.47■□□□□ 0.87
TRAPPC12-220ENST00000482645 KDELR1P24390 212 aa20.47■□□□□ 0.87
TRAPPC12-220ENST00000482645 GRSF1Q12849 480 aaKnown RBP eCLIP20.47■□□□□ 0.87
TRAPPC12-220ENST00000482645 LMAN2Q12907 356 aa20.47■□□□□ 0.87
TRAPPC12-220ENST00000482645 PDK2Q15119 407 aa20.47■□□□□ 0.87
TRAPPC12-220ENST00000482645 SEL1L2Q5TEA6 688 aa20.47■□□□□ 0.87
TRAPPC12-220ENST00000482645 AADACL2Q6P093 401 aa20.47■□□□□ 0.87
TRAPPC12-220ENST00000482645 C1orf228Q6PIY5 440 aa20.47■□□□□ 0.87
TRAPPC12-220ENST00000482645 FIBINQ8TAL6 211 aa20.47■□□□□ 0.87
TRAPPC12-220ENST00000482645 COG1Q8WTW3 980 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms