RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 TMEM215Q68D42 235 aa6.81□□□□□ -1.32
CHD6-209ENST00000482596 ZCCHC8Q6NZY4 707 aaKnown RBP6.81□□□□□ -1.32
CHD6-209ENST00000482596 PIK3AP1Q6ZUJ8 805 aa6.81□□□□□ -1.32
CHD6-209ENST00000482596 DDX42Q86XP3 938 aaKnown RBP eCLIP6.81□□□□□ -1.32
CHD6-209ENST00000482596 DCP1BQ8IZD4 617 aaKnown RBP6.81□□□□□ -1.32
CHD6-209ENST00000482596 UNC5BQ8IZJ1 945 aa6.81□□□□□ -1.32
CHD6-209ENST00000482596 CACNA2D3Q8IZS8 1091 aa6.81□□□□□ -1.32
CHD6-209ENST00000482596 AHI1Q8N157 1196 aa6.81□□□□□ -1.32
CHD6-209ENST00000482596 REXO1Q8N1G1 1221 aaKnown RBP6.81□□□□□ -1.32
CHD6-209ENST00000482596 OR2T34Q8NGX1 318 aa6.81□□□□□ -1.32
CHD6-209ENST00000482596 ZDHHC1Q8WTX9 485 aa6.81□□□□□ -1.32
CHD6-209ENST00000482596 GTF3C6Q969F1 213 aa6.81□□□□□ -1.32
CHD6-209ENST00000482596 NACC1Q96RE7 527 aa6.81□□□□□ -1.32
CHD6-209ENST00000482596 NEUROG2Q9H2A3 272 aa6.81□□□□□ -1.32
CHD6-209ENST00000482596 MTG2Q9H4K7 406 aa6.81□□□□□ -1.32
CHD6-209ENST00000482596 NDFIP2Q9NV92 336 aa6.81□□□□□ -1.32
CHD6-209ENST00000482596 ASF1BQ9NVP2 202 aa6.81□□□□□ -1.32
CHD6-209ENST00000482596 FBXL12Q9NXK8 326 aa6.81□□□□□ -1.32
CHD6-209ENST00000482596 ARHGAP20Q9P2F6 1191 aa6.81□□□□□ -1.32
CHD6-209ENST00000482596 GGT7Q9UJ14 662 aa6.81□□□□□ -1.32
CHD6-209ENST00000482596 FBXO10Q9UK96 956 aa6.81□□□□□ -1.32
CHD6-209ENST00000482596 LOC101059948A0A1B0GTJ6 334 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 A0A1W2PP55 124 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 A0A1W2PQM1 296 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 SERTM1A2A2V5 107 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 LRRC72A6NJI9 287 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 SFI1A8K8P3 1242 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 RNF225M0QZC1 329 aaPredicted RBP6.8□□□□□ -1.32
CHD6-209ENST00000482596 M0R2N6 131 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 FURINP09958 794 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 BMP4P12644 408 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 PCSK6P29122 969 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 MAT2AP31153 395 aaKnown RBP6.8□□□□□ -1.32
CHD6-209ENST00000482596 CCKBRP32239 447 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 TXLNAP40222 546 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 PER3P56645 1201 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 CCL7P80098 99 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 TLE4Q04727 773 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 EHHADHQ08426 723 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 TRDNQ13061 729 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 PPP2R5CQ13362 524 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 ART3Q13508 389 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 ZBTB6Q15916 424 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 DEFB133Q30KQ1 61 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 Q4G0T1 1027 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 JMJD6Q6NYC1 403 aaPredicted RBP6.8□□□□□ -1.32
CHD6-209ENST00000482596 BIVMQ86UB2 503 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 IQCHQ86VS3 1027 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 SLFN12Q8IYM2 578 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 THEM5Q8N1Q8 247 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 NXPE1Q8N323 547 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 GPBAR1Q8TDU6 330 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 PTPRN2Q92932 1015 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 SNRNP40Q96DI7 357 aaKnown RBP6.8□□□□□ -1.32
CHD6-209ENST00000482596 DUSP23Q9BVJ7 150 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 CIPCQ9C0C6 399 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 CDH19Q9H159 772 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 GLT8D2Q9H1C3 349 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 C2orf40Q9H1Z8 148 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 SLKQ9H2G2 1235 aaPredicted RBP6.8□□□□□ -1.32
CHD6-209ENST00000482596 CXXC4Q9H2H0 198 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 PABPC3Q9H361 631 aaKnown RBP6.8□□□□□ -1.32
CHD6-209ENST00000482596 POLD4Q9HCU8 107 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 C6orf50Q9HD87 102 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 PRSS16Q9NQE7 514 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 SEMA3GQ9NS98 782 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 KLHL11Q9NVR0 708 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 ELOVL2Q9NXB9 296 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 MARK1Q9P0L2 795 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 TNFSF13BQ9Y275 285 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 PCDHA5Q9Y5H7 936 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 KLF2Q9Y5W3 355 aaPredicted RBP6.8□□□□□ -1.32
CHD6-209ENST00000482596 MRPS18BQ9Y676 258 aaKnown RBP6.8□□□□□ -1.32
CHD6-209ENST00000482596 MYO7BQ6PIF6 2116 aa6.8□□□□□ -1.32
CHD6-209ENST00000482596 ZGRF1Q86YA3 2104 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 NEMP2A6NFY4 417 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 ABLIM1O14639 778 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 COCHO43405 550 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 LATO43561 262 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 GREM1O60565 184 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 RFPL1O75677 317 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 CXCL8P10145 99 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 CCL4P13236 92 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 ZNF16P17020 682 aaPredicted RBP6.79□□□□□ -1.32
CHD6-209ENST00000482596 MX1P20591 662 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 ACAT1P24752 427 aaKnown RBP6.79□□□□□ -1.32
CHD6-209ENST00000482596 GUCY2CP25092 1073 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 HTR1EP28566 365 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 MCM5P33992 734 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 TRAPPC10P48553 1259 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 IST1P53990 364 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 CTBSQ01459 385 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 ZBTB16Q05516 673 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 ELOAQ14241 798 aaKnown RBP6.79□□□□□ -1.32
CHD6-209ENST00000482596 NR0B2Q15466 257 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 CCDC181Q5TID7 509 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 PPP4R3AQ6IN85 833 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 CLEC9AQ6UXN8 241 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 TMEM135Q86UB9 458 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 TPH2Q8IWU9 490 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms