RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 ZNF148Q9UQR1 794 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 CCL26Q9Y258 94 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 CHD7Q9P2D1 2997 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 NUP210Q8TEM1 1887 aaPredicted RBP12.85□□□□□ -0.35
IFT88-206ENST00000482172 TYW5A2RUC4 315 aaKnown RBP12.85□□□□□ -0.35
IFT88-206ENST00000482172 H7C0C1 242 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 SLC9A3R1O14745 358 aaPredicted RBP12.85□□□□□ -0.35
IFT88-206ENST00000482172 PPP1R12AO14974 1030 aaPredicted RBP12.85□□□□□ -0.35
IFT88-206ENST00000482172 RAD51CO43502 376 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 MFSD11O43934 449 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 CLDN11O75508 207 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 GAS8O95995 478 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 TUBBP07437 444 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 ATP5OP48047 213 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 KCNJ1P48048 391 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 YBEYP58557 167 aaPredicted RBP12.85□□□□□ -0.35
IFT88-206ENST00000482172 DLX2Q07687 328 aaPredicted RBP12.85□□□□□ -0.35
IFT88-206ENST00000482172 GALNT2Q10471 571 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 CBX2Q14781 532 aaPredicted RBP12.85□□□□□ -0.35
IFT88-206ENST00000482172 ERCC6LQ2NKX8 1250 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 MPPE1Q53F39 396 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 ALFQ53S48 1182 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 SLC45A4Q5BKX6 768 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 RFWD3Q6PCD5 774 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 JAMLQ86YT9 394 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 CDKL3Q8IVW4 592 aaPredicted RBP12.85□□□□□ -0.35
IFT88-206ENST00000482172 BBS7Q8IWZ6 715 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 ALLCQ8N6M5 410 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 GPR161Q8N6U8 529 aaKnown RBP12.85□□□□□ -0.35
IFT88-206ENST00000482172 NPWQ8N729 165 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 HJURPQ8NCD3 748 aaPredicted RBP12.85□□□□□ -0.35
IFT88-206ENST00000482172 CCHCR1Q8TD31 782 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 TFB1MQ8WVM0 346 aaKnown RBP12.85□□□□□ -0.35
IFT88-206ENST00000482172 SMARCD2Q92925 531 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 HDAC11Q96DB2 347 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 TMA16Q96EY4 203 aaKnown RBP12.85□□□□□ -0.35
IFT88-206ENST00000482172 LRCH3Q96II8 777 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 PRICKLE1Q96MT3 831 aaPredicted RBP12.85□□□□□ -0.35
IFT88-206ENST00000482172 ASB16Q96NS5 453 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 FERMT1Q9BQL6 677 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 APOL5Q9BWW9 433 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 SMG9Q9H0W8 520 aaKnown RBP12.85□□□□□ -0.35
IFT88-206ENST00000482172 CDH7Q9ULB5 785 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 MFHAS1Q9Y4C4 1052 aa12.85□□□□□ -0.35
IFT88-206ENST00000482172 DOCK4Q8N1I0 1966 aa12.84□□□□□ -0.35
IFT88-206ENST00000482172 A0A1B0GVM2 712 aa12.84□□□□□ -0.35
IFT88-206ENST00000482172 TCAF2A6NFQ2 919 aa12.84□□□□□ -0.35
IFT88-206ENST00000482172 BHMG1C9JSJ3 638 aaPredicted RBP12.84□□□□□ -0.35
IFT88-206ENST00000482172 TTI1O43156 1089 aa12.84□□□□□ -0.35
IFT88-206ENST00000482172 CNTN5O94779 1100 aa12.84□□□□□ -0.35
IFT88-206ENST00000482172 PRAMEF12O95522 483 aa12.84□□□□□ -0.35
IFT88-206ENST00000482172 IRAK1P51617 712 aa12.84□□□□□ -0.35
IFT88-206ENST00000482172 PPIDQ08752 370 aaKnown RBP12.84□□□□□ -0.35
IFT88-206ENST00000482172 PRKD1Q15139 912 aaPredicted RBP12.84□□□□□ -0.35
IFT88-206ENST00000482172 FAM78AQ5JUQ0 283 aa12.84□□□□□ -0.35
IFT88-206ENST00000482172 RNF43Q68DV7 783 aa12.84□□□□□ -0.35
IFT88-206ENST00000482172 DARS2Q6PI48 645 aaKnown RBP12.84□□□□□ -0.35
IFT88-206ENST00000482172 ZNF783Q6ZMS7 281 aa12.84□□□□□ -0.35
IFT88-206ENST00000482172 GET4Q7L5D6 327 aaPredicted RBP12.84□□□□□ -0.35
IFT88-206ENST00000482172 SETD3Q86TU7 594 aaPredicted RBP12.84□□□□□ -0.35
IFT88-206ENST00000482172 SMRP1Q8NCR6 262 aa12.84□□□□□ -0.35
IFT88-206ENST00000482172 RTP4Q96DX8 246 aa12.84□□□□□ -0.35
IFT88-206ENST00000482172 MYEOVQ96EZ4 313 aa12.84□□□□□ -0.35
IFT88-206ENST00000482172 CCDC114Q96M63 670 aa12.84□□□□□ -0.35
IFT88-206ENST00000482172 TSGA13Q96PP4 275 aa12.84□□□□□ -0.35
IFT88-206ENST00000482172 QKIQ96PU8 341 aaKnown RBP eCLIP12.84□□□□□ -0.35
IFT88-206ENST00000482172 FAM118BQ9BPY3 351 aa12.84□□□□□ -0.35
IFT88-206ENST00000482172 RAB17Q9H0T7 212 aa12.84□□□□□ -0.35
IFT88-206ENST00000482172 USP29Q9HBJ7 922 aa12.84□□□□□ -0.35
IFT88-206ENST00000482172 TBC1D30Q9Y2I9 924 aa12.84□□□□□ -0.35
IFT88-206ENST00000482172 UTP11Q9Y3A2 253 aaKnown RBP12.84□□□□□ -0.35
IFT88-206ENST00000482172 NEU2Q9Y3R4 380 aa12.84□□□□□ -0.35
IFT88-206ENST00000482172 MYO9BQ13459 2157 aa12.83□□□□□ -0.36
IFT88-206ENST00000482172 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.83□□□□□ -0.36
IFT88-206ENST00000482172 ARHGAP42A6NI28 874 aa12.83□□□□□ -0.36
IFT88-206ENST00000482172 MTSS1O43312 755 aa12.83□□□□□ -0.36
IFT88-206ENST00000482172 CYBBP04839 570 aa12.83□□□□□ -0.36
IFT88-206ENST00000482172 RHOXF2BP0C7M4 288 aa12.83□□□□□ -0.36
IFT88-206ENST00000482172 CCNCP24863 283 aa12.83□□□□□ -0.36
IFT88-206ENST00000482172 MCM3P25205 808 aa12.83□□□□□ -0.36
IFT88-206ENST00000482172 OR1E1P30953 314 aa12.83□□□□□ -0.36
IFT88-206ENST00000482172 GARSP41250 739 aaKnown RBP12.83□□□□□ -0.36
IFT88-206ENST00000482172 DRG2P55039 364 aaKnown RBP12.83□□□□□ -0.36
IFT88-206ENST00000482172 RPS24P62847 133 aaKnown RBP12.83□□□□□ -0.36
IFT88-206ENST00000482172 ZNF177Q13360 481 aaPredicted RBP12.83□□□□□ -0.36
IFT88-206ENST00000482172 PTK6Q13882 451 aa12.83□□□□□ -0.36
IFT88-206ENST00000482172 PPP1R7Q15435 360 aa12.83□□□□□ -0.36
IFT88-206ENST00000482172 PARP15Q460N3 678 aa12.83□□□□□ -0.36
IFT88-206ENST00000482172 C6orf118Q5T5N4 469 aa12.83□□□□□ -0.36
IFT88-206ENST00000482172 C4orf22Q6V702 233 aa12.83□□□□□ -0.36
IFT88-206ENST00000482172 GSTA5Q7RTV2 222 aa12.83□□□□□ -0.36
IFT88-206ENST00000482172 ZC3H18Q86VM9 953 aaKnown RBP12.83□□□□□ -0.36
IFT88-206ENST00000482172 ARHGAP12Q8IWW6 846 aa12.83□□□□□ -0.36
IFT88-206ENST00000482172 MICALL1Q8N3F8 863 aa12.83□□□□□ -0.36
IFT88-206ENST00000482172 CCDC89Q8N998 374 aa12.83□□□□□ -0.36
IFT88-206ENST00000482172 TDRD5Q8NAT2 981 aaKnown RBP12.83□□□□□ -0.36
IFT88-206ENST00000482172 RSAD2Q8WXG1 361 aa12.83□□□□□ -0.36
IFT88-206ENST00000482172 SEC14L1Q92503 715 aa12.83□□□□□ -0.36
IFT88-206ENST00000482172 SUSD6Q92537 303 aa12.83□□□□□ -0.36
IFT88-206ENST00000482172 FATE1Q969F0 183 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms