RNA–Protein interactions for RNA: ENST00000481478.1

CACNA1D-206, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 1 (best)

Gene CACNA1D, Length 5,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-206ENST00000481478 TRIM66O15016 1216 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 CTSEP14091 401 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 RPL3P39023 403 aaKnown RBP13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 MAPK8P45983 427 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 NR2C2P49116 596 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 DNAJC3Q13217 504 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 PDPK2PQ6A1A2 396 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 MZT2AQ6P582 158 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 KDM7AQ6ZMT4 941 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 ANKRD27Q96NW4 1050 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 SPATA5L1Q9BVQ7 753 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 RBM22Q9NW64 420 aaKnown RBP eCLIP13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 TMEM216Q9P0N5 145 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 DLGAP2Q9P1A6 1054 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 TNPO3Q9Y5L0 923 aaKnown RBP13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 LRRC37A3O60309 1634 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 A0A087X0T9 212 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 ZBTB14O43829 449 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 AKAP5P24588 427 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 CAP2P40123 477 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 CPA2P48052 419 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 THOP1P52888 689 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 TRIM32Q13049 653 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 XRCC4Q13426 336 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 GMCL1P1Q8NEA9 526 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 REXO4Q9GZR2 422 aaKnown RBP13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 A1CFQ9NQ94 594 aaKnown RBP13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 ZNF232Q9UNY5 417 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 FAM50BQ9Y247 325 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 URADA6NGE7 173 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 QSOX1O00391 747 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 KPNA5O15131 536 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 PROSCO94903 275 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 HSMCR30P0CW71 290 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 PTPN11Q06124 597 aaPredicted RBP13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 MSLNQ13421 630 aaPredicted RBP13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 TBCELQ5QJ74 424 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 ATL1Q8WXF7 558 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 SUSD6Q92537 303 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 FAM118BQ9BPY3 351 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 FAIM2Q9BWQ8 316 aa13.23□□□□□ -0.29
CACNA1D-206ENST00000481478 MED24O75448 989 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 TGFB3P10600 412 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 CYP11B1P15538 503 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 MLH1P40692 756 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 KCNJ1P48048 391 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 BCL2L1Q07817 233 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 BTG3Q14201 252 aaPredicted RBP13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 RCN1Q15293 331 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 FNDC3BQ53EP0 1204 aaKnown RBP13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 TTC23Q5W5X9 447 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 USP45Q70EL2 814 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 METTL3Q86U44 580 aaKnown RBP13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 SPACA7Q96KW9 195 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 PAFAH2Q99487 392 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 EXO5Q9H790 373 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 CYP4F12Q9HCS2 524 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 KLHL41O60662 606 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 KLHL18O94889 574 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 TSPAN19P0C672 248 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 POLR2EP19388 210 aaKnown RBP13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 PLIN5Q00G26 463 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 EPS8Q12929 822 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 TRMT5Q32P41 509 aaKnown RBP13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 ERMARDQ5T6L9 678 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 PCNX4Q63HM2 1172 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 BHLHB9Q6PI77 547 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 METTL7BQ6UX53 244 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 KYQ8NBH2 561 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 TBCDQ9BTW9 1192 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 TMEM39BQ9GZU3 492 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 THAP2Q9H0W7 228 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 LRRC10BA6NIK2 292 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 NDUFS2O75306 463 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 BAIAP3O94812 1187 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 PRLRP16471 622 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 PGAM1P18669 254 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 BACE1P56817 501 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 Q4G0T1 1027 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 FAXCQ5TGI0 409 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 PAPD7Q5XG87 772 aaKnown RBP13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 GATAD2AQ86YP4 633 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 ZNF248Q8NDW4 579 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 KLHL1Q9NR64 748 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 CROTQ9UKG9 612 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 ZBTB12Q9Y330 459 aaPredicted RBP13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 NDUFAF1Q9Y375 327 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 SPEF2Q9C093 1822 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 SGTAO43765 313 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 CATP04040 527 aaKnown RBP13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 ABCB1P08183 1280 aaPredicted RBP13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 TYMPP19971 482 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 KLRC1P26715 233 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 C1QBPQ07021 282 aaKnown RBP13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 KCNT1Q5JUK3 1230 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 NT5DC3Q86UY8 548 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 KDM3BQ7LBC6 1761 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 AMHR2Q16671 573 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 AGKQ53H12 422 aa13.22□□□□□ -0.29
CACNA1D-206ENST00000481478 SETMARQ53H47 684 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms