RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 H0Y626 953 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 RNF103O00237 685 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 DLDP09622 509 aaKnown RBP11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 FERP16591 822 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 GLDCP23378 1020 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 ITPKAP23677 461 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 RRM1P23921 792 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 MPLP40238 635 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 NSFP46459 744 aaKnown RBP11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 METAP1P53582 386 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 HDAC4P56524 1084 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 ZNF445P59923 1031 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 EIF4HQ15056 248 aaKnown RBP11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 PLEKHG6Q3KR16 790 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 PPP1R15BQ5SWA1 713 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 SDE2Q6IQ49 451 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 WDR59Q6PJI9 974 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 TRIM72Q6ZMU5 477 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 PRR23CQ6ZRP0 262 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 NUDT18Q6ZVK8 323 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 TFAP2DQ7Z6R9 452 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 FAM124AQ86V42 546 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 TMPRSS6Q8IU80 811 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 RNF214Q8ND24 703 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 CPLX3Q8WVH0 158 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 PGAP3Q96FM1 320 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 PSMB7Q99436 277 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 DDX50Q9BQ39 737 aaKnown RBP11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 WDCPQ9H6R7 721 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 RRAGDQ9NQL2 400 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 ZNF212Q9UDV6 495 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 SERGEFQ9UGK8 458 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 NEU3Q9UQ49 428 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 ERVW-1Q9UQF0 538 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 OR51B4Q9Y5P0 310 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 ACTL7AQ9Y615 435 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 SPEGQ15772 3267 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 CKAP5Q14008 2032 aa11.76□□□□□ -0.53
RAPGEF1-207ENST00000481260 A0A0D9SEW6 157 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 BCLAF3A2AJT9 711 aaKnown RBP11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 PLK4O00444 970 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 AP5Z1O43299 807 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 CCP110O43303 1012 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 TIMM44O43615 452 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 SNAP91O60641 907 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 SRGAP2O75044 1071 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 SIN3BO75182 1162 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 ENDOD1O94919 500 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 MT-CO1P00395 513 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 POLR2EP19388 210 aaKnown RBP11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 MAOBP27338 520 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 RDXP35241 583 aaKnown RBP11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 TPMTP51580 245 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 UBASH3AP57075 661 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 RPS14P62263 151 aaKnown RBP11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 ZNF252P-AS1Q0IIN9 211 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 CAMK2GQ13555 558 aaPredicted RBP11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 CSRP2Q16527 193 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 C5orf22Q49AR2 442 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 GLIPR1L2Q4G1C9 344 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 FILIP1LQ4L180 1135 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 DAB2IPQ5VWQ8 1189 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 HGSNATQ68CP4 663 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 ACAD10Q6JQN1 1059 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 MCOLN2Q8IZK6 566 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 PYROXD2Q8N2H3 581 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 FAM172AQ8WUF8 416 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 UCMAQ8WVF2 138 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 PIGKQ92643 395 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 TOE1Q96GM8 510 aaKnown RBP11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 MCEEQ96PE7 176 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 XPO4Q9C0E2 1151 aaKnown RBP11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 PRDM16Q9HAZ2 1276 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 NDFIP2Q9NV92 336 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 USP36Q9P275 1121 aaKnown RBP11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 STAP1Q9ULZ2 295 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 DAAM1Q9Y4D1 1078 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 THADAQ6YHU6 1953 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 NUMA1Q14980 2115 aa11.75□□□□□ -0.53
RAPGEF1-207ENST00000481260 A0A1B0GVM2 712 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 TCAF2A6NFQ2 919 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 DRGXA6NNA5 263 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 E9PAM4 449 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 K7ERQ8 282 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 MAP3K13O43283 966 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 SYNCRIPO60506 623 aaKnown RBP11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 CAVIN2O95810 425 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 GYPCP04921 128 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 SLC2A3P11169 496 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 KRT3P12035 628 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 TNFAIP3P21580 790 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 SNX16P57768 344 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 RPL6Q02878 288 aaKnown RBP11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 STARD3Q14849 445 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 ELF2Q15723 593 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 BRMS1LQ5PSV4 323 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 C9orf64Q5T6V5 341 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 SFMBT2Q5VUG0 894 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 RNF219Q5W0B1 726 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms