RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 HOXD9P28356 352 aaPredicted RBP11.82□□□□□ -0.52
CBWD3-206ENST00000478048 SLC1A1P43005 524 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 AIF1P55008 147 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 MESP2Q0VG99 397 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 SEMA3BQ13214 749 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 MTA1Q13330 715 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 HADHQ16836 314 aaKnown RBP11.82□□□□□ -0.52
CBWD3-206ENST00000478048 MPPE1Q53F39 396 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 SLC44A4Q53GD3 710 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 BOLA3Q53S33 107 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 MANEALQ5VSG8 457 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 TXNDC11Q6PKC3 985 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 RNF10Q8N5U6 811 aaKnown RBP11.82□□□□□ -0.52
CBWD3-206ENST00000478048 KIAA1524Q8TCG1 905 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 RPRD1AQ96P16 312 aaPredicted RBP11.82□□□□□ -0.52
CBWD3-206ENST00000478048 KCTD15Q96SI1 283 aaPredicted RBP11.82□□□□□ -0.52
CBWD3-206ENST00000478048 DDX50Q9BQ39 737 aaKnown RBP11.82□□□□□ -0.52
CBWD3-206ENST00000478048 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.82□□□□□ -0.52
CBWD3-206ENST00000478048 MPP6Q9NZW5 540 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 MARK1Q9P0L2 795 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 CA14Q9ULX7 337 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 NEU3Q9UQ49 428 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 PIAS3Q9Y6X2 628 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 ATG2BQ96BY7 2078 aa11.81□□□□□ -0.52
CBWD3-206ENST00000478048 HOXC11O43248 304 aaPredicted RBP11.81□□□□□ -0.52
CBWD3-206ENST00000478048 ZSCAN12O43309 604 aa11.81□□□□□ -0.52
CBWD3-206ENST00000478048 CREB3O43889 395 aa11.81□□□□□ -0.52
CBWD3-206ENST00000478048 FTCDO95954 541 aa11.81□□□□□ -0.52
CBWD3-206ENST00000478048 CD48P09326 243 aa11.81□□□□□ -0.52
CBWD3-206ENST00000478048 L1CAMP32004 1257 aa11.81□□□□□ -0.52
CBWD3-206ENST00000478048 OPRD1P41143 372 aa11.81□□□□□ -0.52
CBWD3-206ENST00000478048 SLC6A11P48066 632 aa11.81□□□□□ -0.52
CBWD3-206ENST00000478048 MARCKSL1P49006 195 aa11.81□□□□□ -0.52
CBWD3-206ENST00000478048 PFKPQ01813 784 aa11.81□□□□□ -0.52
CBWD3-206ENST00000478048 GAD2Q05329 585 aa11.81□□□□□ -0.52
CBWD3-206ENST00000478048 C5orf22Q49AR2 442 aa11.81□□□□□ -0.52
CBWD3-206ENST00000478048 ALFQ53S48 1182 aa11.81□□□□□ -0.52
CBWD3-206ENST00000478048 C17orf53Q8N3J3 647 aaPredicted RBP11.81□□□□□ -0.52
CBWD3-206ENST00000478048 WFDC5Q8TCV5 224 aa11.81□□□□□ -0.52
CBWD3-206ENST00000478048 TEKT4Q8WW24 435 aa11.81□□□□□ -0.52
CBWD3-206ENST00000478048 KRT35Q92764 455 aa11.81□□□□□ -0.52
CBWD3-206ENST00000478048 CD101Q93033 1021 aa11.81□□□□□ -0.52
CBWD3-206ENST00000478048 PACSIN2Q9UNF0 486 aaPredicted RBP11.81□□□□□ -0.52
CBWD3-206ENST00000478048 TECTAO75443 2155 aa11.81□□□□□ -0.52
CBWD3-206ENST00000478048 IGLV3-10A0A075B6K4 115 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 KRBA1A5PL33 1030 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 DRGXA6NNA5 263 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 SPECC1L-ADORA2AF8WAN1 911 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 DXOO77932 396 aaKnown RBP11.8□□□□□ -0.52
CBWD3-206ENST00000478048 CYBBP04839 570 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 CD72P21854 359 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 CTHP32929 405 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 ARSEP51690 589 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 ZXDAP98168 799 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 NRG1Q02297 640 aaPredicted RBP11.8□□□□□ -0.52
CBWD3-206ENST00000478048 NR1H3Q13133 447 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 DPYSL2Q16555 572 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 IFI16Q16666 785 aaKnown RBP11.8□□□□□ -0.52
CBWD3-206ENST00000478048 PPP6R3Q5H9R7 873 aaPredicted RBP11.8□□□□□ -0.52
CBWD3-206ENST00000478048 NT5DC3Q86UY8 548 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 PSTKQ8IV42 348 aaKnown RBP11.8□□□□□ -0.52
CBWD3-206ENST00000478048 ETFBKMTQ8IXQ9 262 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 UBALD2Q8IYN6 164 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 CCAR2Q8N163 923 aaKnown RBP11.8□□□□□ -0.52
CBWD3-206ENST00000478048 HJURPQ8NCD3 748 aaPredicted RBP11.8□□□□□ -0.52
CBWD3-206ENST00000478048 SNIP1Q8TAD8 396 aaKnown RBP11.8□□□□□ -0.52
CBWD3-206ENST00000478048 RAPGEF5Q92565 580 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 CALR3Q96L12 384 aaKnown RBP11.8□□□□□ -0.52
CBWD3-206ENST00000478048 PCDH18Q9HCL0 1135 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 FBRSL1Q9HCM7 1045 aaKnown RBP11.8□□□□□ -0.52
CBWD3-206ENST00000478048 NUP205Q92621 2012 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 PI4K2BG5E9Z4 385 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 CACNG3O60359 315 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 TULP3O75386 442 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 KRT7P08729 469 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 GOT1P17174 413 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 CDH6P55285 790 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 MLF2Q15773 248 aaPredicted RBP11.8□□□□□ -0.52
CBWD3-206ENST00000478048 FSCBQ5H9T9 825 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 RABGAP1LQ5R372 815 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 MPP7Q5T2T1 576 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 RNF43Q68DV7 783 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 RWDD4Q6NW29 188 aaKnown RBP11.8□□□□□ -0.52
CBWD3-206ENST00000478048 LRRC31Q6UY01 552 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 TPRG1Q6ZUI0 275 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 RHOT1Q8IXI2 618 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 CARNMT1Q8N4J0 409 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 TBC1D31Q96DN5 1066 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 ARHGEF3Q9NR81 526 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 NDFIP2Q9NV92 336 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 CWC15Q9P013 229 aaKnown RBP11.8□□□□□ -0.52
CBWD3-206ENST00000478048 PPARGC1AQ9UBK2 798 aaKnown RBP11.8□□□□□ -0.52
CBWD3-206ENST00000478048 WNT16Q9UBV4 365 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 ZNF212Q9UDV6 495 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 FBXL21Q9UKT6 434 aa11.8□□□□□ -0.52
CBWD3-206ENST00000478048 MYO18AQ92614 2054 aaKnown RBP11.79□□□□□ -0.52
CBWD3-206ENST00000478048 ANTXRLA6NF34 631 aa11.79□□□□□ -0.52
CBWD3-206ENST00000478048 CISD3P0C7P0 127 aa11.79□□□□□ -0.52
CBWD3-206ENST00000478048 IL4RP24394 825 aa11.79□□□□□ -0.52
CBWD3-206ENST00000478048 EPHB2P29323 1055 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms