RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 PLD2O14939 933 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 KIAA0391O15091 583 aaKnown RBP7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 ALPPL2P10696 532 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 LIPCP11150 499 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 RALAP11233 206 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 POLR2EP19388 210 aaKnown RBP7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 C5AR1P21730 350 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 ELAVL4P26378 380 aaKnown RBP7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 MAT2AP31153 395 aaKnown RBP7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 CD70P32970 193 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 DRD3P35462 400 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 MYL6P60660 151 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 EFEMP1Q12805 493 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 ZNF177Q13360 481 aaPredicted RBP7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 TRIP4Q15650 581 aaPredicted RBP7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 CDKN3Q16667 212 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 BMT2Q1RMZ1 405 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 ARL6IP4Q66PJ3 421 aaKnown RBP7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 GUSBP11Q6P575 273 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 CLEC20AQ6ZU45 233 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 CCDC186Q7Z3E2 898 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 TICAM1Q8IUC6 712 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 C12orf29Q8N999 325 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 KDM1BQ8NB78 822 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 WFDC5Q8TCV5 224 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 NOC3LQ8WTT2 800 aaKnown RBP7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 ZNF516Q92618 1163 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 TMA16Q96EY4 203 aaKnown RBP7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 CALML4Q96GE6 196 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 AK8Q96MA6 479 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 PHF12Q96QT6 1004 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 CDK5RAP1Q96SZ6 601 aaKnown RBP7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 SDCBP2Q9H190 292 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 SMYD3Q9H7B4 428 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 VRTNQ9H8Y1 702 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 EVA1BQ9NVM1 165 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 TBC1D7Q9P0N9 293 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 SEL1LQ9UBV2 794 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 RASAL2Q9UJF2 1139 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 TUBD1Q9UJT1 453 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 STOML2Q9UJZ1 356 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 CSMD1Q96PZ7 3565 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 CELSR2Q9HCU4 2923 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 POLQO75417 2590 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 CPED1A4D0V7 1026 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 NVLO15381 856 aaKnown RBP7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 RNGTTO60942 597 aaKnown RBP7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 RTN2O75298 545 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 NEBLO76041 1014 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 ATICP31939 592 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 UGT1A5P35504 534 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 UBA7P41226 1012 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 PSMD8P48556 350 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 IRX6P78412 446 aaPredicted RBP7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 KCNAB2Q13303 367 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 EIF3IQ13347 325 aaKnown RBP7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 MANEAQ5SRI9 462 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 ZCCHC8Q6NZY4 707 aaKnown RBP7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 CRTC1Q6UUV9 634 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 EFL1Q7Z2Z2 1120 aaKnown RBP7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 VASH2Q86V25 355 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 TRIM69Q86WT6 500 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 DTX1Q86Y01 620 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 SYCP3Q8IZU3 236 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 FBXO39Q8N4B4 442 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 ZSCAN1Q8NBB4 408 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 RDH13Q8NBN7 331 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 LARP4BQ92615 738 aaKnown RBP7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 IFT43Q96FT9 208 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 FGFBP2Q9BYJ0 223 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 PNPLA8Q9NP80 782 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 OLFML3Q9NRN5 406 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 TMPRSS4Q9NRS4 437 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 MARCH2Q9P0N8 246 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 INTS6Q9UL03 887 aaKnown RBP7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 CENPEQ02224 2701 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 ITPR3Q14573 2671 aa7.61□□□□□ -1.19
SPTLC1-205ENST00000477888 PLXNA2O75051 1894 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 TTC34A8MYJ7 566 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 NTN3O00634 580 aaPredicted RBP7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 PLRG1O43660 514 aaKnown RBP7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 GCNT3O95395 438 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 ADH1BP00325 375 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 FAM200BP0CF97 657 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 DLATP10515 647 aaKnown RBP7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 TNNI1P19237 187 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 TNFRSF8P28908 595 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 CLCN1P35523 988 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 SGSHP51688 502 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 METAP1P53582 386 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 POLE2P56282 527 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 ZNF445P59923 1031 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 ST8SIA6P61647 398 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 KRTAP21-3Q3LHN1 58 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 POM121L1PQ3SYA9 428 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 ZNF542PQ5EBM4 170 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 PERM1Q5SV97 790 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 MPP7Q5T2T1 576 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 ADGRF1Q5T601 910 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms