RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 KCTD13Q8WZ19 329 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 UROC1Q96N76 676 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 NAP1L4Q99733 375 aaKnown RBP4.98□□□□□ -1.61
CKS1B-207ENST00000477676 TARS2Q9BW92 718 aaKnown RBP4.98□□□□□ -1.61
CKS1B-207ENST00000477676 C2orf40Q9H1Z8 148 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 ARRDC1-AS1Q9H2J1 176 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 FBRSL1Q9HCM7 1045 aaKnown RBP4.98□□□□□ -1.61
CKS1B-207ENST00000477676 TUFT1Q9NNX1 390 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 GTSE1Q9NYZ3 720 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 ARHGAP28Q9P2N2 729 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 TUBGCP4Q9UGJ1 667 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 AFF4Q9UHB7 1163 aaKnown RBP4.98□□□□□ -1.61
CKS1B-207ENST00000477676 WASF3Q9UPY6 502 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 TNFSF13BQ9Y275 285 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 MRPS17Q9Y2R5 130 aaKnown RBP4.98□□□□□ -1.61
CKS1B-207ENST00000477676 YIPF1Q9Y548 306 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 SHROOM3Q8TF72 1996 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 NUMA1Q14980 2115 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 URB1O60287 2271 aaKnown RBP4.97□□□□□ -1.61
CKS1B-207ENST00000477676 PCDH15Q96QU1 1955 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 PP2D1A8MPX8 630 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 SPECC1L-ADORA2AF8WAN1 911 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 M0QZQ0 153 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 ZNF197O14709 1029 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 ZNF263O14978 683 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 SYN3O14994 580 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 CHADO15335 359 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 FAM189A1O60320 539 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 TADA3O75528 432 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 REC8O95072 547 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 ZNF806P0C7X5 589 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 ELF1P32519 619 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 AARSP49588 968 aaKnown RBP eCLIP4.97□□□□□ -1.61
CKS1B-207ENST00000477676 LIMK1P53667 647 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 MLLT6P55198 1093 aaPredicted RBP4.97□□□□□ -1.61
CKS1B-207ENST00000477676 PEX3P56589 373 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 NANOS3P60323 173 aaKnown RBP4.97□□□□□ -1.61
CKS1B-207ENST00000477676 SHC2P98077 582 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 DPTQ07507 201 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 ABHD18Q0P651 414 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 ZNF174Q15697 407 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 ZBTB6Q15916 424 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 CTXN3Q4LDR2 81 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 MIIPQ5JXC2 388 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 TPGS2Q68CL5 300 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 TCEAL6Q6IPX3 200 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 CPLX2Q6PUV4 134 aaKnown RBP4.97□□□□□ -1.61
CKS1B-207ENST00000477676 PDZD4Q76G19 769 aaPredicted RBP4.97□□□□□ -1.61
CKS1B-207ENST00000477676 DPH6Q7L8W6 267 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 TMEM150AQ86TG1 271 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 WDR5BQ86VZ2 330 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 LONP2Q86WA8 852 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 ZNF227Q86WZ6 799 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 ARID3BQ8IVW6 561 aaPredicted RBP4.97□□□□□ -1.61
CKS1B-207ENST00000477676 ATAD1Q8NBU5 361 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 DEPTORQ8TB45 409 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 LRRC15Q8TF66 581 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 DEPDC1BQ8WUY9 529 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 SECISBP2LQ93073 1101 aaKnown RBP4.97□□□□□ -1.61
CKS1B-207ENST00000477676 TCEAL3Q969E4 200 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 GTF3C6Q969F1 213 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 CCDC43Q96MW1 224 aaKnown RBP4.97□□□□□ -1.61
CKS1B-207ENST00000477676 PGLYRP2Q96PD5 576 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 ADPGKQ9BRR6 497 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 IER2Q9BTL4 223 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 MMTAG2Q9BU76 263 aaKnown RBP4.97□□□□□ -1.61
CKS1B-207ENST00000477676 BHMT2Q9H2M3 363 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 SEC61A2Q9H9S3 476 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 HPS4Q9NQG7 708 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 DLL4Q9NR61 685 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 HSPBP1Q9NZL4 362 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 RAB23Q9ULC3 237 aa4.97□□□□□ -1.61
CKS1B-207ENST00000477676 TP53BP1Q12888 1972 aaPredicted RBP4.96□□□□□ -1.61
CKS1B-207ENST00000477676 TTC26A0AVF1 554 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 MTMR11A4FU01 709 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 ARHGEF35A5YM69 484 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 E9PMD0 336 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 K7ERI5 159 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 DCLK1O15075 740 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 EPB41L2O43491 1005 aaKnown RBP4.96□□□□□ -1.62
CKS1B-207ENST00000477676 TRAPPC3O43617 180 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 HIP1RO75146 1068 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 CDKL5O76039 1030 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 OAZ2O95190 189 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 EPN2O95208 641 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 KCNK5O95279 499 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 CXCL8P10145 99 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 HARSP12081 509 aaKnown RBP4.96□□□□□ -1.62
CKS1B-207ENST00000477676 ATF6P18850 670 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 U2AF2P26368 475 aaKnown RBP eCLIP4.96□□□□□ -1.62
CKS1B-207ENST00000477676 CDC25AP30304 524 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 HOXA6P31267 233 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 RPL9P32969 192 aaKnown RBP4.96□□□□□ -1.62
CKS1B-207ENST00000477676 TNFSF9P41273 254 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 TOB1P50616 345 aaPredicted RBP4.96□□□□□ -1.62
CKS1B-207ENST00000477676 EFNA5P52803 228 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 CYP4A22Q5TCH4 519 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 STPG1Q5TH74 334 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 CENPPQ6IPU0 288 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 FSTL4Q6MZW2 842 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms