RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 ADAM23O75077 832 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 ADAM11O75078 769 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 WFS1O76024 890 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 GSTP1P09211 210 aaKnown RBP7.6□□□□□ -1.19
BRCA1-214ENST00000477152 CCDC130P13994 396 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 GABRG2P18507 467 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 HOXC13P31276 330 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 PSMC2P35998 433 aaKnown RBP7.6□□□□□ -1.19
BRCA1-214ENST00000477152 CACNA2D1P54289 1103 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 SIM1P81133 766 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-214ENST00000477152 INCA1Q0VD86 236 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 SEMA3BQ13214 749 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 CUL4BQ13620 913 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 SUZ12Q15022 739 aaKnown RBP7.6□□□□□ -1.19
BRCA1-214ENST00000477152 NFIL3Q16649 462 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 PLEKHG6Q3KR16 790 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 KIAA1324Q6UXG2 1013 aaKnown RBP7.6□□□□□ -1.19
BRCA1-214ENST00000477152 TPGS1Q6ZTW0 290 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 RSRC2Q7L4I2 434 aaKnown RBP7.6□□□□□ -1.19
BRCA1-214ENST00000477152 SCNM1Q9BWG6 230 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 PCED1AQ9H1Q7 454 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 DMAC2Q9NW81 257 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 MSRB2Q9Y3D2 182 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 ACACBO00763 2458 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 DMDP11532 3685 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 TPRP12270 2363 aaKnown RBP7.6□□□□□ -1.19
BRCA1-214ENST00000477152 IGHV1OR15-9A0A0B4J2B8 117 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 A0A1B0GTW7 788 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 CER1O95813 267 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 HLA-DRAP01903 254 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 CMA1P23946 247 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 CD6P30203 668 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 PTGER3P43115 390 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 CASP4P49662 377 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 KRT85P78386 507 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 SCARA3Q6AZY7 606 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 PAQR9Q6ZVX9 377 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 CCDC186Q7Z3E2 898 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 CCDC117Q8IWD4 279 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-214ENST00000477152 MINDY1Q8N5J2 469 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 TRIML1Q8N9V2 468 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 CADM4Q8NFZ8 388 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 GATAD2BQ8WXI9 593 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 PRCCQ92733 491 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-214ENST00000477152 PAGE5Q96GU1 130 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 HEXIM2Q96MH2 286 aaKnown RBP7.6□□□□□ -1.19
BRCA1-214ENST00000477152 HSPA12BQ96MM6 686 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 SMOQ99835 787 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 NUP58Q9BVL2 599 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 DUSP16Q9BY84 665 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 CCDC86Q9H6F5 360 aaKnown RBP7.6□□□□□ -1.19
BRCA1-214ENST00000477152 FBRSQ9HAH7 460 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 PRDM16Q9HAZ2 1276 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 FAM49BQ9NUQ9 324 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 MBD1Q9UIS9 605 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-214ENST00000477152 RASAL2Q9UJF2 1139 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 RCOR1Q9UKL0 485 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 CYP8B1Q9UNU6 501 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 TRAF3IP3Q9Y228 551 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 SLC27A6Q9Y2P4 619 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 EPB41P11171 864 aaKnown RBP7.59□□□□□ -1.19
BRCA1-214ENST00000477152 NR2F2P24468 414 aa7.59□□□□□ -1.19
BRCA1-214ENST00000477152 SYKP43405 635 aa7.59□□□□□ -1.19
BRCA1-214ENST00000477152 HARS2P49590 506 aaKnown RBP7.59□□□□□ -1.19
BRCA1-214ENST00000477152 SNRPNP63162 240 aaKnown RBP7.59□□□□□ -1.19
BRCA1-214ENST00000477152 INAVAQ3KP66 663 aa7.59□□□□□ -1.19
BRCA1-214ENST00000477152 KRT39Q6A163 491 aa7.59□□□□□ -1.19
BRCA1-214ENST00000477152 CLEC20AQ6ZU45 233 aa7.59□□□□□ -1.19
BRCA1-214ENST00000477152 ANKS1BQ7Z6G8 1248 aa7.59□□□□□ -1.19
BRCA1-214ENST00000477152 FAM186BQ8IYM0 893 aa7.59□□□□□ -1.19
BRCA1-214ENST00000477152 GPBAR1Q8TDU6 330 aa7.59□□□□□ -1.19
BRCA1-214ENST00000477152 RNF139Q8WU17 664 aa7.59□□□□□ -1.19
BRCA1-214ENST00000477152 ZCCHC14Q8WYQ9 949 aaKnown RBP7.59□□□□□ -1.19
BRCA1-214ENST00000477152 JAKMIP2Q96AA8 810 aa7.59□□□□□ -1.19
BRCA1-214ENST00000477152 SKA1Q96BD8 255 aa7.59□□□□□ -1.19
BRCA1-214ENST00000477152 ZNF419Q96HQ0 510 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-214ENST00000477152 SPATA32Q96LK8 384 aa7.59□□□□□ -1.19
BRCA1-214ENST00000477152 TSG101Q99816 390 aa7.59□□□□□ -1.19
BRCA1-214ENST00000477152 TMEM8AQ9HCN3 771 aa7.59□□□□□ -1.19
BRCA1-214ENST00000477152 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.59□□□□□ -1.19
BRCA1-214ENST00000477152 RMND1Q9NWS8 449 aa7.59□□□□□ -1.19
BRCA1-214ENST00000477152 HESX1Q9UBX0 185 aa7.59□□□□□ -1.19
BRCA1-214ENST00000477152 PLA2G4CQ9UP65 541 aa7.59□□□□□ -1.19
BRCA1-214ENST00000477152 NME7Q9Y5B8 376 aa7.59□□□□□ -1.19
BRCA1-214ENST00000477152 FRYLO94915 3013 aa7.59□□□□□ -1.19
BRCA1-214ENST00000477152 CNOT1A5YKK6 2376 aaKnown RBP7.59□□□□□ -1.19
BRCA1-214ENST00000477152 SPTBN2O15020 2390 aa7.59□□□□□ -1.19
BRCA1-214ENST00000477152 A0A1W2PQH9 124 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 TYW5A2RUC4 315 aaKnown RBP7.59□□□□□ -1.2
BRCA1-214ENST00000477152 C1QTNF9BB2RNN3 333 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 CETN3O15182 167 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 VNN1O95497 513 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 C1QTNF9P0C862 333 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 WASP42768 502 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 ASPAP45381 313 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 KIF11P52732 1056 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 STK4Q13043 487 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 ADAM9Q13443 819 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 FOXD4L6Q3SYB3 417 aaPredicted RBP7.59□□□□□ -1.2
BRCA1-214ENST00000477152 MPPE1Q53F39 396 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms