RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 CEP135Q66GS9 1140 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 SND1Q7KZF4 910 aaKnown RBP eCLIP11.8□□□□□ -0.52
BRCA1-213ENST00000476777 MFN1Q8IWA4 741 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 GRAMD1CQ8IYS0 662 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 KDM1BQ8NB78 822 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 OR14C36Q8NHC7 312 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 FIBINQ8TAL6 211 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 RNF139Q8WU17 664 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 SNRNP27Q8WVK2 155 aaKnown RBP11.8□□□□□ -0.52
BRCA1-213ENST00000476777 FAM129BQ96TA1 746 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 IRX2Q9BZI1 471 aaPredicted RBP11.8□□□□□ -0.52
BRCA1-213ENST00000476777 ZSCAN16Q9H4T2 348 aaPredicted RBP11.8□□□□□ -0.52
BRCA1-213ENST00000476777 ARHGAP20Q9P2F6 1191 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 FRMD4BQ9Y2L6 1034 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 TARSL2A2RTX5 802 aaKnown RBP11.79□□□□□ -0.52
BRCA1-213ENST00000476777 YJEFN3A6XGL0 299 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 E7ENQ6 273 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 XPO1O14980 1071 aaKnown RBP11.79□□□□□ -0.52
BRCA1-213ENST00000476777 MAPK13O15264 365 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 IRAK2O43187 625 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 CUTAO60888 179 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 SDC3O75056 442 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 IGLV3-27P01718 113 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 ASLP04424 464 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 MPOP05164 745 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 TRIM49P0CI25 452 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 TRIM49CP0CI26 452 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 CTSOP43234 321 aaPredicted RBP11.79□□□□□ -0.52
BRCA1-213ENST00000476777 SLC8A3P57103 927 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 ADIGQ0VDE8 80 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 KIF26BQ2KJY2 2108 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 BROXQ5VW32 411 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 CDCP2Q5VXM1 449 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 NAPEPLDQ6IQ20 393 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 IQCHQ86VS3 1027 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 SLC25A45Q8N413 288 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 ZNF557Q8N988 423 aaPredicted RBP11.79□□□□□ -0.52
BRCA1-213ENST00000476777 MYEOVQ96EZ4 313 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 IPO9Q96P70 1041 aaKnown RBP11.79□□□□□ -0.52
BRCA1-213ENST00000476777 LRRC4Q9HBW1 653 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 CISHQ9NSE2 258 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 STIM2Q9P246 746 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 ERVW-1Q9UQF0 538 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 RP1P56715 2156 aa11.79□□□□□ -0.52
BRCA1-213ENST00000476777 TBC1D3DA0A087WVF3 549 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 TBC1D3IA0A087WXS9 549 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 TBC1D3EA0A087X179 549 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 TBC1D3KA0A087X1G2 549 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 EDDM13A0A1B0GTR0 161 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 TBC1D3FA6NER0 549 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-213ENST00000476777 TBC1D3LB9A6J9 549 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 ACSL4O60488 711 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 ADH1BP00325 375 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 SRPRAP08240 638 aaKnown RBP11.78□□□□□ -0.52
BRCA1-213ENST00000476777 TBC1D3HP0C7X1 549 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 PDIA4P13667 645 aaKnown RBP11.78□□□□□ -0.52
BRCA1-213ENST00000476777 C5AR1P21730 350 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 DRD3P35462 400 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 SLC11A2P49281 568 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 ERVPABLB-1P60509 514 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 RPS24P62847 133 aaKnown RBP11.78□□□□□ -0.52
BRCA1-213ENST00000476777 GABREP78334 506 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 OVGP1Q12889 678 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 GOLGA7BQ2TAP0 167 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 FSCBQ5H9T9 825 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 PITRM1Q5JRX3 1037 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 ERICH6BQ5W0A0 696 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 TBC1D3GQ6DHY5 549 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 NADSYN1Q6IA69 706 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 TBC1D3CQ6IPX1 549 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 MSANTD2Q6P1R3 559 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 MMS22LQ6ZRQ5 1243 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 INTS8Q75QN2 995 aaKnown RBP11.78□□□□□ -0.52
BRCA1-213ENST00000476777 TBC1D3Q8IZP1 549 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-213ENST00000476777 LSMEM2Q8N112 164 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 STK40Q8N2I9 435 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 TTC39CQ8N584 583 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 HJURPQ8NCD3 748 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-213ENST00000476777 CCDC150Q8NCX0 1101 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 KCNE4Q8WWG9 221 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 SEMA4DQ92854 862 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 TATDN2Q93075 761 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 FAM131CQ96AQ9 280 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 FAXDC2Q96IV6 333 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 PRICKLE1Q96MT3 831 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-213ENST00000476777 MMRN2Q9H8L6 949 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 ABCC13Q9NSE7 274 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 SLCO3A1Q9UIG8 710 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 ITIH6Q6UXX5 1313 aa11.78□□□□□ -0.52
BRCA1-213ENST00000476777 KLK10O43240 276 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 OPA1O60313 960 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 MAGEC1O60732 1142 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 USP12O75317 370 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 WISP1O95388 367 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 YEATS4O95619 227 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 MZF1P28698 734 aaPredicted RBP11.77□□□□□ -0.53
BRCA1-213ENST00000476777 LSSP48449 732 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 DAB2P98082 770 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 ECT2LQ008S8 904 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 VAC14Q08AM6 782 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms