RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 CFAP61Q8NHU2 1237 aa16.88■□□□□ 0.29
TMEM53-208ENST00000476724 SIKE1Q9BRV8 207 aa16.88■□□□□ 0.29
TMEM53-208ENST00000476724 WWP1Q9H0M0 922 aa16.88■□□□□ 0.29
TMEM53-208ENST00000476724 RNPEPL1Q9HAU8 725 aa16.88■□□□□ 0.29
TMEM53-208ENST00000476724 PIGVQ9NUD9 493 aa16.88■□□□□ 0.29
TMEM53-208ENST00000476724 DCDC2Q9UHG0 476 aa16.88■□□□□ 0.29
TMEM53-208ENST00000476724 GIT1Q9Y2X7 761 aa16.88■□□□□ 0.29
TMEM53-208ENST00000476724 NUMBLQ9Y6R0 609 aa16.88■□□□□ 0.29
TMEM53-208ENST00000476724 MYO18AQ92614 2054 aaKnown RBP16.88■□□□□ 0.29
TMEM53-208ENST00000476724 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.87■□□□□ 0.29
TMEM53-208ENST00000476724 A0A0U1RQF3 1178 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 ARVCFO00192 962 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 MTSS1O43312 755 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 ZNF623O75123 536 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 SNNO75324 88 aaPredicted RBP16.87■□□□□ 0.29
TMEM53-208ENST00000476724 F9P00740 461 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 LMNAP02545 664 aaKnown RBP16.87■□□□□ 0.29
TMEM53-208ENST00000476724 POLBP06746 335 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 MGAT1P26572 445 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 DAOAP59103 153 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 PITX1P78337 314 aaPredicted RBP16.87■□□□□ 0.29
TMEM53-208ENST00000476724 ARL13BQ3SXY8 428 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 TLDC1Q6P9B6 456 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 PACS1Q6VY07 963 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 PID1Q7Z2X4 250 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 C3orf58Q8NDZ4 430 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 TRIM56Q9BRZ2 755 aaKnown RBP16.87■□□□□ 0.29
TMEM53-208ENST00000476724 KRT82Q9NSB4 513 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 ARL8BQ9NVJ2 186 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 THAP1Q9NVV9 213 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 SYNJ2BP-COX16A0A087WUM0 186 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 FAM237BA0A1B0GVD1 139 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 CASTOR2A6NHX0 329 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 POMCP01189 267 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 PSMB4P28070 264 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 SESN2P58004 480 aaPredicted RBP16.87■□□□□ 0.29
TMEM53-208ENST00000476724 STX3Q13277 289 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 CRYMQ14894 314 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 INSCQ1MX18 579 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 TEX44Q53QW1 395 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 RAB41Q5JT25 222 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 SPANXN3Q5MJ09 141 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 RTN4RL1Q86UN2 441 aaPredicted RBP16.87■□□□□ 0.29
TMEM53-208ENST00000476724 SLC7A14Q8TBB6 771 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 SYT15Q9BQS2 421 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 MECRQ9BV79 373 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 ULBP1Q9BZM6 244 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 CRTAC1Q9NQ79 661 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 COX16Q9P0S2 106 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 FBXW11Q9UKB1 542 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 NR2E3Q9Y5X4 410 aa16.87■□□□□ 0.29
TMEM53-208ENST00000476724 ERI2A8K979 691 aaKnown RBP16.86■□□□□ 0.29
TMEM53-208ENST00000476724 FCHO1O14526 889 aa16.86■□□□□ 0.29
TMEM53-208ENST00000476724 FYNP06241 537 aa16.86■□□□□ 0.29
TMEM53-208ENST00000476724 ESRRAP11474 423 aaPredicted RBP16.86■□□□□ 0.29
TMEM53-208ENST00000476724 ERCC2P18074 760 aa16.86■□□□□ 0.29
TMEM53-208ENST00000476724 SEMA3BQ13214 749 aa16.86■□□□□ 0.29
TMEM53-208ENST00000476724 ACCSLQ4AC99 568 aa16.86■□□□□ 0.29
TMEM53-208ENST00000476724 KIAA0319Q5VV43 1072 aa16.86■□□□□ 0.29
TMEM53-208ENST00000476724 NSMCE1Q8WV22 266 aa16.86■□□□□ 0.29
TMEM53-208ENST00000476724 PGBD4Q96DM1 585 aa16.86■□□□□ 0.29
TMEM53-208ENST00000476724 WDR6Q9NNW5 1121 aaKnown RBP16.86■□□□□ 0.29
TMEM53-208ENST00000476724 FBXO6Q9NRD1 293 aaPredicted RBP16.86■□□□□ 0.29
TMEM53-208ENST00000476724 SEPT10Q9P0V9 454 aa16.86■□□□□ 0.29
TMEM53-208ENST00000476724 CDH9Q9ULB4 789 aa16.86■□□□□ 0.29
TMEM53-208ENST00000476724 GYG2O15488 501 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 PEX11AO75192 247 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 AP1G2O75843 785 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 MX2P20592 715 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 GARSP41250 739 aaKnown RBP16.85■□□□□ 0.29
TMEM53-208ENST00000476724 RAB27AP51159 221 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 TPI1P60174 286 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 FRG1Q14331 258 aaKnown RBP16.85■□□□□ 0.29
TMEM53-208ENST00000476724 TBCCQ15814 346 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 HFE2Q6ZVN8 426 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 FAM35AQ86V20 835 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 ARID3BQ8IVW6 561 aaPredicted RBP16.85■□□□□ 0.29
TMEM53-208ENST00000476724 ENDOVQ8N8Q3 282 aaKnown RBP16.85■□□□□ 0.29
TMEM53-208ENST00000476724 LINC01599Q8WXQ3 324 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 DEFB118Q96PH6 123 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 MMADHCQ9H3L0 296 aaPredicted RBP16.85■□□□□ 0.29
TMEM53-208ENST00000476724 LRRC40Q9H9A6 602 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 TMPRSS4Q9NRS4 437 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 KLHL8Q9P2G9 620 aaPredicted RBP16.85■□□□□ 0.29
TMEM53-208ENST00000476724 TXNDC16Q9P2K2 825 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 NRP1O14786 923 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 GSC2O15499 205 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 RPL9P32969 192 aaKnown RBP16.85■□□□□ 0.29
TMEM53-208ENST00000476724 PPIDQ08752 370 aaKnown RBP16.85■□□□□ 0.29
TMEM53-208ENST00000476724 GRTP1Q5TC63 336 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 VAT1Q99536 393 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 CPNE1Q99829 537 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 SMOQ99835 787 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 CADM1Q9BY67 442 aaKnown RBP16.85■□□□□ 0.29
TMEM53-208ENST00000476724 SYBUQ9NX95 663 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 TRHDEQ9UKU6 1024 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 INPP5FQ9Y2H2 1132 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 SQORQ9Y6N5 450 aa16.85■□□□□ 0.29
TMEM53-208ENST00000476724 ZNF638Q14966 1978 aaKnown RBP16.85■□□□□ 0.29
TMEM53-208ENST00000476724 YJEFN3A6XGL0 299 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms