RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, human

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-228	ENST00000476267	STIM1	Q13586	685 aa		13.57	□□□□□ -0.24
MRPL55-228	ENST00000476267	CDH18	Q13634	790 aa		13.57	□□□□□ -0.24
MRPL55-228	ENST00000476267	COL9A2	Q14055	689 aa	Predicted RBP	13.57	□□□□□ -0.24
MRPL55-228	ENST00000476267	MORC3	Q14149	939 aa		13.57	□□□□□ -0.24
MRPL55-228	ENST00000476267	SUZ12	Q15022	739 aa	Known RBP	13.57	□□□□□ -0.24
MRPL55-228	ENST00000476267	SHB	Q15464	509 aa		13.57	□□□□□ -0.24
MRPL55-228	ENST00000476267	SMAD1	Q15797	465 aa	Known RBP	13.57	□□□□□ -0.24
MRPL55-228	ENST00000476267	DENND1B	Q6P3S1	775 aa		13.57	□□□□□ -0.24
MRPL55-228	ENST00000476267	TMEM110	Q86TL2	294 aa		13.57	□□□□□ -0.24
MRPL55-228	ENST00000476267	MARCH9	Q86YJ5	346 aa		13.57	□□□□□ -0.24
MRPL55-228	ENST00000476267	APCDD1	Q8J025	514 aa		13.57	□□□□□ -0.24
MRPL55-228	ENST00000476267	AADAT	Q8N5Z0	425 aa		13.57	□□□□□ -0.24
MRPL55-228	ENST00000476267	NELFB	Q8WX92	580 aa		13.57	□□□□□ -0.24
MRPL55-228	ENST00000476267	PTPRN2	Q92932	1015 aa		13.57	□□□□□ -0.24
MRPL55-228	ENST00000476267	SLC6A18	Q96N87	628 aa		13.57	□□□□□ -0.24
MRPL55-228	ENST00000476267	PRMT1	Q99873	361 aa	Known RBP	13.57	□□□□□ -0.24
MRPL55-228	ENST00000476267	NEUROG2	Q9H2A3	272 aa		13.57	□□□□□ -0.24
MRPL55-228	ENST00000476267	FBXL12	Q9NXK8	326 aa		13.57	□□□□□ -0.24
MRPL55-228	ENST00000476267	SLCO3A1	Q9UIG8	710 aa		13.57	□□□□□ -0.24
MRPL55-228	ENST00000476267	EDDM13	A0A1B0GTR0	161 aa		13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267		A0A1W2PR77	199 aa		13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267	TYW5	A2RUC4	315 aa	Known RBP	13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267		E5RJQ4	531 aa		13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267	WNT9A	O14904	365 aa		13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267	TACR2	P21452	398 aa		13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267	ACADSB	P45954	432 aa		13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267	ST8SIA6	P61647	398 aa		13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267	CETN1	Q12798	172 aa		13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267	RAP1GAP2	Q684P5	730 aa		13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267	NCEH1	Q6PIU2	408 aa		13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267	MMAA	Q8IVH4	418 aa	Known RBP	13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267	OR2T34	Q8NGX1	318 aa		13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267	FAM149B1	Q96BN6	582 aa		13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267	INTS2	Q9H0H0	1204 aa	Known RBP	13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267	POPDC2	Q9HBU9	364 aa		13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267	ACP6	Q9NPH0	428 aa		13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267	TJP2	Q9UDY2	1190 aa		13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267	HOOK1	Q9UJC3	728 aa	Known RBP	13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267	CTNND2	Q9UQB3	1225 aa		13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267	NCKAP1	Q9Y2A7	1128 aa		13.56	□□□□□ -0.24
MRPL55-228	ENST00000476267	ZFYVE26	Q68DK2	2539 aa		13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	GOLGA6L4	A6NEF3	574 aa		13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	BECN2	A8MW95	431 aa		13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	KCNU1	A8MYU2	1149 aa		13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	DFNA5	O60443	496 aa		13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	TRUB2	O95900	331 aa	Known RBP	13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	MOCS2	O96007	188 aa	Predicted RBP	13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	AFP	P02771	609 aa	Known RBP	13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	SLC8A1	P32418	973 aa		13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	DRD3	P35462	400 aa		13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	STK19	P49842	368 aa	Predicted RBP	13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	CCR5	P51681	352 aa		13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	PLK1	P53350	603 aa		13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	ADPRH	P54922	357 aa		13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	YWHAZ	P63104	245 aa	Known RBP	13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	ECT2L	Q008S8	904 aa		13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	IL9R	Q01113	521 aa		13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	KLHL10	Q6JEL2	608 aa		13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	LGI2	Q8N0V4	545 aa		13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	GALNT15	Q8N3T1	639 aa		13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	FRS2	Q8WU20	508 aa		13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	ZNF606	Q8WXB4	792 aa		13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	BTN2A3P	Q96KV6	586 aa		13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	TRIM62	Q9BVG3	475 aa		13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	ACE2	Q9BYF1	805 aa	Predicted RBP	13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	ST7	Q9NRC1	585 aa		13.55	□□□□□ -0.24
MRPL55-228	ENST00000476267	BICDL2	A1A5D9	508 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	LRRC72	A6NJI9	287 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	LAT	O43561	262 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	RNASEH1	O60930	286 aa	Known RBP	13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	RNASEH2A	O75792	299 aa	Known RBP	13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	GNA14	O95837	355 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	APOE	P02649	317 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	VAV1	P15498	845 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	GOT1	P17174	413 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	C5AR1	P21730	350 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	MZF1	P28698	734 aa	Predicted RBP	13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	VASP	P50552	380 aa	Predicted RBP	13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	METAP1	P53582	386 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	PDCL	Q13371	301 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	SLC12A1	Q13621	1099 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	TAF5	Q15542	800 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	COL28A1	Q2UY09	1125 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	CXorf57	Q6NSI4	855 aa	Known RBP	13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	C19orf48	Q6RUI8	117 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	CHSY1	Q86X52	802 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	STK40	Q8N2I9	435 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	WDTC1	Q8N5D0	677 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	SAP25	Q8TEE9	199 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	ALG14	Q96F25	216 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	RPL10L	Q96L21	214 aa	Known RBP	13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	SLC2A13	Q96QE2	648 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	ELF4	Q99607	663 aa	Predicted RBP	13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	THAP9	Q9H5L6	903 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	SCUBE2	Q9NQ36	999 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	ARHGAP20	Q9P2F6	1191 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	RAX	Q9Y2V3	346 aa		13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.54	□□□□□ -0.24
MRPL55-228	ENST00000476267	FAM47DP	A6NHR8	397 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms