RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 SLC7A8Q9UHI5 535 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 TAGLN3Q9UI15 199 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 EMCNQ9ULC0 261 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 HBS1LQ9Y450 684 aaKnown RBP7.07□□□□□ -1.28
UBR4-212ENST00000475973 USP3Q9Y6I4 520 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 FAM237BA0A1B0GVD1 139 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 TRIM49D1C9J1S8 452 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 CAPN9O14815 690 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 SKAP2O75563 359 aaPredicted RBP7.06□□□□□ -1.28
UBR4-212ENST00000475973 DGKIO75912 1065 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 NEBLO76041 1014 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 MICAL2O94851 1124 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 INHBAP08476 426 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 ESRRAP11474 423 aaPredicted RBP7.06□□□□□ -1.28
UBR4-212ENST00000475973 FGF3P11487 239 aaPredicted RBP7.06□□□□□ -1.28
UBR4-212ENST00000475973 HOXD8P13378 290 aaPredicted RBP7.06□□□□□ -1.28
UBR4-212ENST00000475973 CCDC130P13994 396 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 ANPEPP15144 967 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 IGFBP4P22692 258 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 PTPN9P43378 593 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 PSMC1P62191 440 aaKnown RBP7.06□□□□□ -1.28
UBR4-212ENST00000475973 ROR1Q01973 937 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 OVGP1Q12889 678 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 RCN1Q15293 331 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 STILQ15468 1287 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 TAF5Q15542 800 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 DPYSL2Q16555 572 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 USP41Q3LFD5 358 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 BBS9Q3SYG4 887 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 TEDDM1Q5T9Z0 273 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 CYP4A22Q5TCH4 519 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 LGSNQ5TDP6 509 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 MBLAC2Q68D91 279 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 NAIF1Q69YI7 327 aaPredicted RBP7.06□□□□□ -1.28
UBR4-212ENST00000475973 CNKSR3Q6P9H4 555 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 METTL7BQ6UX53 244 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 UNC5AQ6ZN44 842 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 ATG14Q6ZNE5 492 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 TICAM1Q8IUC6 712 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 TMEM126BQ8IUX1 230 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 FAM71DQ8N9W8 422 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 FBXO27Q8NI29 283 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 PCDH19Q8TAB3 1148 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 CCDC110Q8TBZ0 833 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 SPATA18Q8TC71 538 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 MICAL1Q8TDZ2 1067 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 UCMAQ8WVF2 138 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 PRPF31Q8WWY3 499 aaKnown RBP7.06□□□□□ -1.28
UBR4-212ENST00000475973 RSAD2Q8WXG1 361 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 ARNTL2Q8WYA1 636 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 SEPT1Q8WYJ6 367 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 E2F7Q96AV8 911 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 ACSF2Q96CM8 615 aaPredicted RBP7.06□□□□□ -1.28
UBR4-212ENST00000475973 TMEM176AQ96HP8 235 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 SH3GL3Q99963 347 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 PAIP2Q9BPZ3 127 aaKnown RBP7.06□□□□□ -1.28
UBR4-212ENST00000475973 MIS12Q9H081 205 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 WWP1Q9H0M0 922 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 PCDH18Q9HCL0 1135 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 XAB2Q9HCS7 855 aaKnown RBP7.06□□□□□ -1.28
UBR4-212ENST00000475973 EIF2B3Q9NR50 452 aaKnown RBP7.06□□□□□ -1.28
UBR4-212ENST00000475973 ETNK2Q9NVF9 386 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 THAP1Q9NVV9 213 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 THEGQ9P2T0 379 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 VPS28Q9UK41 221 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 ITGA11Q9UKX5 1188 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 CHMP2BQ9UQN3 213 aa7.06□□□□□ -1.28
UBR4-212ENST00000475973 YBX2Q9Y2T7 364 aaKnown RBP7.06□□□□□ -1.28
UBR4-212ENST00000475973 MYH9P35579 1960 aaKnown RBP7.06□□□□□ -1.28
UBR4-212ENST00000475973 SF3B1O75533 1304 aaKnown RBP eCLIP7.05□□□□□ -1.28
UBR4-212ENST00000475973 A0A0G2JND7 137 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 C17orf102A2RUQ5 167 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 EME2A4GXA9 379 aaPredicted RBP7.05□□□□□ -1.28
UBR4-212ENST00000475973 LRRIQ4A6NIV6 560 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 B2RBV5 119 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 GOLGA8SH3BPF8 625 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 GOLGA8MH3BSY2 632 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 HAS3O00219 553 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 COPEO14579 308 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 PLIN3O60664 434 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 KRT38O76015 456 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 KLHL2O95198 593 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 IFNB1P01574 187 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 LGALS2P05162 132 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 PRKCBP05771 671 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 CA3P07451 260 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 LYNP07948 512 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 PABPC4LP0CB38 370 aaKnown RBP7.05□□□□□ -1.28
UBR4-212ENST00000475973 CSH1P0DML2 217 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 CSH2P0DML3 217 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 MCF2P10911 925 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 GNAT1P11488 350 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 CKBP12277 381 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 GPD1P21695 349 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 AMPD1P23109 780 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 CDC25CP30307 473 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 PGM1P36871 562 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 NR2C2P49116 596 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 SLC26A2P50443 739 aa7.05□□□□□ -1.28
UBR4-212ENST00000475973 PAPOLAP51003 745 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms