RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 ATP2A3Q93084 1043 aa7.12□□□□□ -1.27
SMC5-203ENST00000475540 C3orf49Q96BT1 292 aa7.12□□□□□ -1.27
SMC5-203ENST00000475540 CLMNQ96JQ2 1002 aa7.12□□□□□ -1.27
SMC5-203ENST00000475540 ADAD1Q96M93 576 aaKnown RBP7.12□□□□□ -1.27
SMC5-203ENST00000475540 BAG5Q9UL15 447 aa7.12□□□□□ -1.27
SMC5-203ENST00000475540 IGLV5-39A0A0G2JS06 123 aa7.11□□□□□ -1.27
SMC5-203ENST00000475540 AGAP5A6NIR3 686 aa7.11□□□□□ -1.27
SMC5-203ENST00000475540 H3BNX3 289 aa7.11□□□□□ -1.27
SMC5-203ENST00000475540 RHODO00212 210 aa7.11□□□□□ -1.27
SMC5-203ENST00000475540 PSG1P11464 419 aa7.11□□□□□ -1.27
SMC5-203ENST00000475540 ADPRHP54922 357 aa7.11□□□□□ -1.27
SMC5-203ENST00000475540 SMTNL2Q2TAL5 461 aa7.11□□□□□ -1.27
SMC5-203ENST00000475540 KIAA1755Q5JYT7 1200 aa7.11□□□□□ -1.27
SMC5-203ENST00000475540 SULT6B1Q6IMI4 303 aa7.11□□□□□ -1.27
SMC5-203ENST00000475540 B4GALNT4Q76KP1 1039 aa7.11□□□□□ -1.27
SMC5-203ENST00000475540 CENPIQ92674 756 aaPredicted RBP7.11□□□□□ -1.27
SMC5-203ENST00000475540 NLRP4Q96MN2 994 aa7.11□□□□□ -1.27
SMC5-203ENST00000475540 AAMDCQ9H7C9 122 aa7.11□□□□□ -1.27
SMC5-203ENST00000475540 TXNRD2Q9NNW7 524 aa7.11□□□□□ -1.27
SMC5-203ENST00000475540 NDUFAF4Q9P032 175 aa7.11□□□□□ -1.27
SMC5-203ENST00000475540 SQORQ9Y6N5 450 aa7.11□□□□□ -1.27
SMC5-203ENST00000475540 MCIDASD6RGH6 385 aa7.1□□□□□ -1.27
SMC5-203ENST00000475540 PNLIPRP1P54315 467 aa7.1□□□□□ -1.27
SMC5-203ENST00000475540 FOXO1Q12778 655 aa7.1□□□□□ -1.27
SMC5-203ENST00000475540 BIRC2Q13490 618 aa7.1□□□□□ -1.27
SMC5-203ENST00000475540 INPP5JQ15735 1006 aaPredicted RBP7.1□□□□□ -1.27
SMC5-203ENST00000475540 PIK3CD-AS1Q5SR53 167 aa7.1□□□□□ -1.27
SMC5-203ENST00000475540 TTC22Q5TAA0 569 aa7.1□□□□□ -1.27
SMC5-203ENST00000475540 DDIASQ8IXT1 998 aa7.1□□□□□ -1.27
SMC5-203ENST00000475540 CACNA2D3Q8IZS8 1091 aa7.1□□□□□ -1.27
SMC5-203ENST00000475540 OTUD7AQ8TE49 926 aaPredicted RBP7.1□□□□□ -1.27
SMC5-203ENST00000475540 NSMCE1Q8WV22 266 aa7.1□□□□□ -1.27
SMC5-203ENST00000475540 TRAPPC9Q96Q05 1148 aa7.1□□□□□ -1.27
SMC5-203ENST00000475540 NPAS1Q99742 590 aa7.1□□□□□ -1.27
SMC5-203ENST00000475540 PDE11AQ9HCR9 933 aa7.1□□□□□ -1.27
SMC5-203ENST00000475540 ANAPC4Q9UJX5 808 aa7.1□□□□□ -1.27
SMC5-203ENST00000475540 PCDHA12Q9UN75 941 aa7.1□□□□□ -1.27
SMC5-203ENST00000475540 A0A1W2PPC1 479 aa7.09□□□□□ -1.27
SMC5-203ENST00000475540 NDUFB8O95169 186 aa7.09□□□□□ -1.27
SMC5-203ENST00000475540 SYF2O95926 243 aaKnown RBP7.09□□□□□ -1.27
SMC5-203ENST00000475540 WNT1P04628 370 aa7.09□□□□□ -1.27
SMC5-203ENST00000475540 SERPINA4P29622 427 aa7.09□□□□□ -1.27
SMC5-203ENST00000475540 GALNT3Q14435 633 aa7.09□□□□□ -1.27
SMC5-203ENST00000475540 KRT72Q14CN4 511 aa7.09□□□□□ -1.27
SMC5-203ENST00000475540 LEXMQ3ZCV2 418 aa7.09□□□□□ -1.27
SMC5-203ENST00000475540 TTC39AQ5SRH9 613 aa7.09□□□□□ -1.27
SMC5-203ENST00000475540 C6orf10Q5SRN2 563 aa7.09□□□□□ -1.27
SMC5-203ENST00000475540 TANGO2Q6ICL3 276 aa7.09□□□□□ -1.27
SMC5-203ENST00000475540 LIN54Q6MZP7 749 aa7.09□□□□□ -1.27
SMC5-203ENST00000475540 CCDC174Q6PII3 467 aa7.09□□□□□ -1.27
SMC5-203ENST00000475540 MDGA2Q7Z553 956 aa7.09□□□□□ -1.27
SMC5-203ENST00000475540 TECPR1Q7Z6L1 1165 aa7.09□□□□□ -1.27
SMC5-203ENST00000475540 STT3BQ8TCJ2 826 aa7.09□□□□□ -1.27
SMC5-203ENST00000475540 SLC25A28Q96A46 364 aa7.09□□□□□ -1.27
SMC5-203ENST00000475540 RPS6KC1Q96S38 1066 aa7.09□□□□□ -1.27
SMC5-203ENST00000475540 WDR83Q9BRX9 315 aaKnown RBP7.09□□□□□ -1.27
SMC5-203ENST00000475540 KCNJ18B7U540 433 aa7.08□□□□□ -1.28
SMC5-203ENST00000475540 MSI1O43347 362 aaKnown RBP7.08□□□□□ -1.28
SMC5-203ENST00000475540 LCKP06239 509 aa7.08□□□□□ -1.28
SMC5-203ENST00000475540 GAD2Q05329 585 aa7.08□□□□□ -1.28
SMC5-203ENST00000475540 PDCD2Q16342 344 aaPredicted RBP7.08□□□□□ -1.28
SMC5-203ENST00000475540 GALNTL6Q49A17 601 aa7.08□□□□□ -1.28
SMC5-203ENST00000475540 TMEM200AQ86VY9 491 aa7.08□□□□□ -1.28
SMC5-203ENST00000475540 KLBQ86Z14 1044 aa7.08□□□□□ -1.28
SMC5-203ENST00000475540 ENDOVQ8N8Q3 282 aaKnown RBP7.08□□□□□ -1.28
SMC5-203ENST00000475540 EME1Q96AY2 570 aa7.08□□□□□ -1.28
SMC5-203ENST00000475540 MSI2Q96DH6 328 aaKnown RBP7.08□□□□□ -1.28
SMC5-203ENST00000475540 PIGSQ96S52 555 aa7.08□□□□□ -1.28
SMC5-203ENST00000475540 PAGR1Q9BTK6 254 aa7.08□□□□□ -1.28
SMC5-203ENST00000475540 MAGEH1Q9H213 219 aa7.08□□□□□ -1.28
SMC5-203ENST00000475540 FZD3Q9NPG1 666 aa7.08□□□□□ -1.28
SMC5-203ENST00000475540 DTX4Q9Y2E6 619 aa7.08□□□□□ -1.28
SMC5-203ENST00000475540 COMMD10Q9Y6G5 202 aa7.08□□□□□ -1.28
SMC5-203ENST00000475540 TMEM272A0A1B0GTI8 110 aa7.07□□□□□ -1.28
SMC5-203ENST00000475540 hCG_1642624A0A1W2PR95 340 aa7.07□□□□□ -1.28
SMC5-203ENST00000475540 CXorf65A6NEN9 183 aa7.07□□□□□ -1.28
SMC5-203ENST00000475540 HMX3A6NHT5 357 aa7.07□□□□□ -1.28
SMC5-203ENST00000475540 HEXIM1O94992 359 aaKnown RBP7.07□□□□□ -1.28
SMC5-203ENST00000475540 CRYABP02511 175 aaKnown RBP7.07□□□□□ -1.28
SMC5-203ENST00000475540 HOXB9P17482 250 aaPredicted RBP7.07□□□□□ -1.28
SMC5-203ENST00000475540 CHRNA5P30532 468 aa7.07□□□□□ -1.28
SMC5-203ENST00000475540 STAT1P42224 750 aa7.07□□□□□ -1.28
SMC5-203ENST00000475540 RRAGAQ7L523 313 aa7.07□□□□□ -1.28
SMC5-203ENST00000475540 TRAPPC11Q7Z392 1133 aa7.07□□□□□ -1.28
SMC5-203ENST00000475540 ANKS1BQ7Z6G8 1248 aa7.07□□□□□ -1.28
SMC5-203ENST00000475540 IP6K1Q92551 441 aa7.07□□□□□ -1.28
SMC5-203ENST00000475540 RUBCNQ92622 972 aa7.07□□□□□ -1.28
SMC5-203ENST00000475540 KAT2AQ92830 837 aa7.07□□□□□ -1.28
SMC5-203ENST00000475540 DDX23Q9BUQ8 820 aaKnown RBP7.07□□□□□ -1.28
SMC5-203ENST00000475540 TAF1DQ9H5J8 278 aaPredicted RBP7.07□□□□□ -1.28
SMC5-203ENST00000475540 SEPSECSQ9HD40 501 aaKnown RBP7.07□□□□□ -1.28
SMC5-203ENST00000475540 ZBTB40Q9NUA8 1239 aa7.07□□□□□ -1.28
SMC5-203ENST00000475540 TMLHEQ9NVH6 421 aa7.07□□□□□ -1.28
SMC5-203ENST00000475540 LZTS1Q9Y250 596 aa7.07□□□□□ -1.28
SMC5-203ENST00000475540 A0A0G2JK05 382 aa7.06□□□□□ -1.28
SMC5-203ENST00000475540 CD8B2A6NJW9 211 aa7.06□□□□□ -1.28
SMC5-203ENST00000475540 FOXO6A8MYZ6 492 aa7.06□□□□□ -1.28
SMC5-203ENST00000475540 B4DGG1 531 aa7.06□□□□□ -1.28
SMC5-203ENST00000475540 HNRNPRO43390 633 aaKnown RBP7.06□□□□□ -1.28
SMC5-203ENST00000475540 ATG13O75143 517 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms