RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 EBF1Q9UH73 591 aa16.73■□□□□ 0.27
SRM-204ENST00000475189 STON1Q9Y6Q2 735 aa16.73■□□□□ 0.27
SRM-204ENST00000475189 SCINQ9Y6U3 715 aa16.73■□□□□ 0.27
SRM-204ENST00000475189 IGLV3-10A0A075B6K4 115 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 SSU72P8A0A1W2PR75 194 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 E9PAM4 449 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 AXIN1O15169 862 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 HRO43593 1189 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 CLDN11O75508 207 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 HOXB2P14652 356 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 POLR2EP19388 210 aaKnown RBP16.72■□□□□ 0.27
SRM-204ENST00000475189 CDH4P55283 916 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 ZNF252P-AS1Q0IIN9 211 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 E2F5Q15329 346 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 ALFQ53S48 1182 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 CXorf57Q6NSI4 855 aaKnown RBP16.72■□□□□ 0.27
SRM-204ENST00000475189 KIAA1211LQ6NV74 962 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 LRRC31Q6UY01 552 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 RASSF3Q86WH2 238 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 CNGA4Q8IV77 575 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 APCDD1Q8J025 514 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 CYB5D2Q8WUJ1 264 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 NTAN1Q96AB6 310 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 THAP2Q9H0W7 228 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 OSBPL2Q9H1P3 480 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 SEMA4AQ9H3S1 761 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 MRPL47Q9HD33 250 aaKnown RBP16.72■□□□□ 0.27
SRM-204ENST00000475189 RAD54BQ9Y620 910 aa16.72■□□□□ 0.27
SRM-204ENST00000475189 VPS13AQ96RL7 3174 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 ZFHX2Q9C0A1 2572 aaPredicted RBP16.71■□□□□ 0.27
SRM-204ENST00000475189 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.71■□□□□ 0.27
SRM-204ENST00000475189 TCRBV21S2A2A0A5A6 115 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 SRGAP2O75044 1071 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 ATP5BP06576 529 aaKnown RBP16.71■□□□□ 0.27
SRM-204ENST00000475189 DLDP09622 509 aaKnown RBP16.71■□□□□ 0.27
SRM-204ENST00000475189 PSMA2P25787 234 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 CSKP41240 450 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 MRE11P49959 708 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 NRG1Q02297 640 aaPredicted RBP16.71■□□□□ 0.27
SRM-204ENST00000475189 GFPT1Q06210 699 aaPredicted RBP16.71■□□□□ 0.27
SRM-204ENST00000475189 SRSF5Q13243 272 aaKnown RBP16.71■□□□□ 0.27
SRM-204ENST00000475189 ZNF177Q13360 481 aaPredicted RBP16.71■□□□□ 0.27
SRM-204ENST00000475189 SLC12A1Q13621 1099 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 SLC18A3Q16572 532 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 PTPRNQ16849 979 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 PLEKHG6Q3KR16 790 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 PITRM1Q5JRX3 1037 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 ANO7Q6IWH7 933 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 SCYL2Q6P3W7 929 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 TC2NQ8N9U0 490 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 MDGA1Q8NFP4 955 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 OR52K2Q8NGK3 314 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 FNIP1Q8TF40 1166 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 NKD2Q969F2 451 aaPredicted RBP16.71■□□□□ 0.27
SRM-204ENST00000475189 ANP32EQ9BTT0 268 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 MPP6Q9NZW5 540 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 OR12D3Q9UGF7 316 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 PLA2G4CQ9UP65 541 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 TBC1D30Q9Y2I9 924 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 CHD5Q8TDI0 1954 aa16.71■□□□□ 0.27
SRM-204ENST00000475189 PLXND1Q9Y4D7 1925 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 FAM72CH0Y354 149 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 ALDH1A2O94788 518 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 MOCS3O95396 460 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 CYP1A2P05177 515 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 DESP17661 470 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 PRKCHP24723 683 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 MZF1P28698 734 aaPredicted RBP16.7■□□□□ 0.26
SRM-204ENST00000475189 CNR2P34972 360 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 PLK1P53350 603 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 GALCP54803 685 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 SCAPQ12770 1279 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 FNDC3BQ53EP0 1204 aaKnown RBP16.7■□□□□ 0.26
SRM-204ENST00000475189 FAM72AQ5TYM5 149 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 MANEALQ5VSG8 457 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 FAM72DQ6L9T8 149 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 SLFN11Q7Z7L1 901 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 FAM72BQ86X60 149 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 ARFGAP1Q8N6T3 406 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 SUMF1Q8NBK3 374 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 HMGB4Q8WW32 186 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 ARHGEF26Q96DR7 871 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 ERLEC1Q96DZ1 483 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 ALG14Q96F25 216 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 TPSD1Q9BZJ3 242 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 EPC1Q9H2F5 836 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 TMEM245Q9H330 911 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 DEF6Q9H4E7 631 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 NHEJ1Q9H9Q4 299 aaPredicted RBP16.7■□□□□ 0.26
SRM-204ENST00000475189 PPARGC1AQ9UBK2 798 aaKnown RBP16.7■□□□□ 0.26
SRM-204ENST00000475189 FZD10Q9ULW2 581 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 SDK1Q7Z5N4 2213 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 ABCA7Q8IZY2 2146 aa16.7■□□□□ 0.26
SRM-204ENST00000475189 ASLP04424 464 aa16.69■□□□□ 0.26
SRM-204ENST00000475189 HLA-EP13747 358 aa16.69■□□□□ 0.26
SRM-204ENST00000475189 GABRG2P18507 467 aa16.69■□□□□ 0.26
SRM-204ENST00000475189 CTSOP43234 321 aaPredicted RBP16.69■□□□□ 0.26
SRM-204ENST00000475189 OXCT1P55809 520 aa16.69■□□□□ 0.26
SRM-204ENST00000475189 SERPINA13PQ6UXR4 307 aa16.69■□□□□ 0.26
SRM-204ENST00000475189 PYROXD2Q8N2H3 581 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms