RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 PYROXD2Q8N2H3 581 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 NIPA2Q8N8Q9 360 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 ZNF564Q8TBZ8 553 aaPredicted RBP7.23□□□□□ -1.25
LIMD1-204ENST00000474665 WFDC5Q8TCV5 224 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 CTNNBL1Q8WYA6 563 aaPredicted RBP7.23□□□□□ -1.25
LIMD1-204ENST00000474665 RFFLQ8WZ73 363 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 DNASE1L2Q92874 299 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 ATP2A3Q93084 1043 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 BHMTQ93088 406 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 IGSF8Q969P0 613 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 OTUB2Q96DC9 234 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 LMLNQ96KR4 655 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 BTN2A3PQ96KV6 586 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 PPP1R9BQ96SB3 815 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 DCLK3Q9C098 648 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 TKTL2Q9H0I9 626 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 GOLPH3Q9H4A6 298 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 SPHK2Q9NRA0 654 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.23□□□□□ -1.25
LIMD1-204ENST00000474665 THG1LQ9NWX6 298 aaKnown RBP7.23□□□□□ -1.25
LIMD1-204ENST00000474665 PLK2Q9NYY3 685 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 CTTNBP2NLQ9P2B4 639 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 TBC1D14Q9P2M4 693 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 UVRAGQ9P2Y5 699 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 ZNF212Q9UDV6 495 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 ANAPC7Q9UJX3 599 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 FBXO10Q9UK96 956 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 GPSM3Q9Y4H4 160 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 SCINQ9Y6U3 715 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 IGSF10Q6WRI0 2623 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 ITPR1Q14643 2758 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 IGLV3-10A0A075B6K4 115 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 BTNL10A8MVZ5 291 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 ARHGAP6O43182 974 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 CACNG3O60359 315 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 BUB1BO60566 1050 aaPredicted RBP7.22□□□□□ -1.25
LIMD1-204ENST00000474665 PROSCO94903 275 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 APOEP02649 317 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 SLC2A3P11169 496 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 ADH5P11766 374 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 TYRP14679 529 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 TACR2P21452 398 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 GBP1P32455 592 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 PCK1P35558 622 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 ARSEP51690 589 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 VAV2P52735 878 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 HADHBP55084 474 aaKnown RBP7.22□□□□□ -1.25
LIMD1-204ENST00000474665 SPA17Q15506 151 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 MLF2Q15773 248 aaPredicted RBP7.22□□□□□ -1.25
LIMD1-204ENST00000474665 ATP13A4Q4VNC1 1196 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 ALFQ53S48 1182 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 BRMS1LQ5PSV4 323 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 STPG1Q5TH74 334 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 CIR1Q86X95 450 aaPredicted RBP7.22□□□□□ -1.25
LIMD1-204ENST00000474665 LGI2Q8N0V4 545 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 CFAP52Q8N1V2 620 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 NAT16Q8N8M0 369 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 LRRC57Q8N9N7 239 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 OR52K2Q8NGK3 314 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 NTAN1Q96AB6 310 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 C1orf74Q96LT6 269 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 HAPLN3Q96S86 360 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 SIK2Q9H0K1 926 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 WDCPQ9H6R7 721 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 MRPL47Q9HD33 250 aaKnown RBP7.22□□□□□ -1.25
LIMD1-204ENST00000474665 GPATCH2LQ9NWQ4 482 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 PCSK1NQ9UHG2 260 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 LSM7Q9UK45 103 aaKnown RBP7.22□□□□□ -1.25
LIMD1-204ENST00000474665 FZD10Q9ULW2 581 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 ZNF510Q9Y2H8 683 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 HYOU1Q9Y4L1 999 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 PIAS3Q9Y6X2 628 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 AKAP13Q12802 2813 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 CKAP5Q14008 2032 aa7.22□□□□□ -1.25
LIMD1-204ENST00000474665 ABCA7Q8IZY2 2146 aa7.21□□□□□ -1.25
LIMD1-204ENST00000474665 SHROOM3Q8TF72 1996 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 A0A0A0MRY4 1105 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 A0A0A6YYK5 440 aaPredicted RBP7.21□□□□□ -1.26
LIMD1-204ENST00000474665 DRGXA6NNA5 263 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 NEDD8-MDP1E9PL57 170 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 MYO1FO00160 1098 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 HRO43593 1189 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 TULP3O75386 442 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 CNTN5O94779 1100 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 LRIG2O94898 1065 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 NFATC1O95644 943 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 ADH1CP00326 375 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 RARAP10276 462 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 IL4RP24394 825 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 TARSP26639 723 aaKnown RBP7.21□□□□□ -1.26
LIMD1-204ENST00000474665 HLA-FP30511 346 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 MAN1A1P33908 653 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 CHKAP35790 457 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 SLC11A2P49281 568 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 NOVA1P51513 510 aaKnown RBP7.21□□□□□ -1.26
LIMD1-204ENST00000474665 GALK1P51570 392 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 PFKPQ01813 784 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 NRG1Q02297 640 aaPredicted RBP7.21□□□□□ -1.26
LIMD1-204ENST00000474665 C19orf57Q0VDD7 668 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 SRSF5Q13243 272 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms