RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 HOXD12P35452 270 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 SULT1E1P49888 294 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 ZNF165P49910 485 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 OXCT1P55809 520 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 ECT2LQ008S8 904 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 ARID5BQ14865 1188 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 PLEKHG6Q3KR16 790 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 TRIM61Q5EBN2 209 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 SYCP2LQ5T4T6 812 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 IL31Q6EBC2 164 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 CIR1Q86X95 450 aaPredicted RBP11.54□□□□□ -0.56
CKS1B-206ENST00000474215 SLC41A1Q8IVJ1 513 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 APCDD1Q8J025 514 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 SLC30A5Q8TAD4 765 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 CEP76Q8TAP6 659 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 FOXJ1Q92949 421 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 IGSF8Q969P0 613 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 TOE1Q96GM8 510 aaKnown RBP11.54□□□□□ -0.56
CKS1B-206ENST00000474215 MYO19Q96H55 970 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 MRGPRX3Q96LB0 322 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 C1orf74Q96LT6 269 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 HSPA12BQ96MM6 686 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 PPP1R9BQ96SB3 815 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 PCDHB18PQ96TA0 734 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 TBCBQ99426 244 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 EDEM2Q9BV94 578 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 NUP58Q9BVL2 599 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 NUSAP1Q9BXS6 441 aaKnown RBP11.54□□□□□ -0.56
CKS1B-206ENST00000474215 TKTL2Q9H0I9 626 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 RTN4Q9NQC3 1192 aaKnown RBP11.54□□□□□ -0.56
CKS1B-206ENST00000474215 ARHGEF38Q9NXL2 777 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 EVLQ9UI08 416 aaPredicted RBP11.54□□□□□ -0.56
CKS1B-206ENST00000474215 VANGL2Q9ULK5 521 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 HS3ST4Q9Y661 456 aa11.54□□□□□ -0.56
CKS1B-206ENST00000474215 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.53□□□□□ -0.56
CKS1B-206ENST00000474215 TM4SF5O14894 197 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 TEX33O43247 280 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 CLDN11O75508 207 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 UNGP13051 313 aaPredicted RBP11.53□□□□□ -0.56
CKS1B-206ENST00000474215 FLT3P36888 993 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 CTSOP43234 321 aaPredicted RBP11.53□□□□□ -0.56
CKS1B-206ENST00000474215 NSFP46459 744 aaKnown RBP11.53□□□□□ -0.56
CKS1B-206ENST00000474215 PLK1P53350 603 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 RPS14P62263 151 aaKnown RBP11.53□□□□□ -0.56
CKS1B-206ENST00000474215 CENPCQ03188 943 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 ZBTB16Q05516 673 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 ZNF177Q13360 481 aaPredicted RBP11.53□□□□□ -0.56
CKS1B-206ENST00000474215 DUOXA1Q1HG43 343 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 KLHL40Q2TBA0 621 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 HNRNPA1L2Q32P51 320 aaKnown RBP11.53□□□□□ -0.56
CKS1B-206ENST00000474215 C5orf22Q49AR2 442 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 ACBD5Q5T8D3 534 aaPredicted RBP11.53□□□□□ -0.56
CKS1B-206ENST00000474215 PEAR1Q5VY43 1037 aaPredicted RBP11.53□□□□□ -0.56
CKS1B-206ENST00000474215 RNF219Q5W0B1 726 aaPredicted RBP11.53□□□□□ -0.56
CKS1B-206ENST00000474215 CXorf57Q6NSI4 855 aaKnown RBP11.53□□□□□ -0.56
CKS1B-206ENST00000474215 TRNP1Q6NT89 227 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 SLC23A3Q6PIS1 610 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 BNIPLQ7Z465 357 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 RABEPKQ7Z6M1 372 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 C14orf80Q86SX3 495 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 CADM4Q8NFZ8 388 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 CFAP57Q96MR6 1250 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 FEM1AQ9BSK4 669 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 GPR174Q9BXC1 333 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 MTG2Q9H4K7 406 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 ANLNQ9NQW6 1124 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 SLCO3A1Q9UIG8 710 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 SLC6A14Q9UN76 642 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 THADAQ6YHU6 1953 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 RALGAPA1Q6GYQ0 2036 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 CACNA1AO00555 2505 aa11.53□□□□□ -0.56
CKS1B-206ENST00000474215 MED19A0JLT2 244 aaPredicted RBP11.52□□□□□ -0.57
CKS1B-206ENST00000474215 TARSL2A2RTX5 802 aaKnown RBP11.52□□□□□ -0.57
CKS1B-206ENST00000474215 DRGXA6NNA5 263 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 C4orf47A7E2U8 309 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 METTL12A8MUP2 240 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 TTC34A8MYJ7 566 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 I6L893 689 aaPredicted RBP11.52□□□□□ -0.57
CKS1B-206ENST00000474215 ENDOD1O94919 500 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 DNTTP04053 509 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 CFIP05156 583 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 SERPINF2P08697 491 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 CCDC172P0C7W6 258 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 PDGFRAP16234 1089 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 FERP16591 822 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 MZF1P28698 734 aaPredicted RBP11.52□□□□□ -0.57
CKS1B-206ENST00000474215 GGCXP38435 758 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 NNMTP40261 264 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 IRAK1P51617 712 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 CDH4P55283 916 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 SULT2A1Q06520 285 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 PTP4A2Q12974 167 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 IQCB1Q15051 598 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 CLEC16AQ2KHT3 1053 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 FILIP1LQ4L180 1135 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 WDR45BQ5MNZ6 344 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 C9orf64Q5T6V5 341 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 ZNF776Q68DI1 518 aaPredicted RBP11.52□□□□□ -0.57
CKS1B-206ENST00000474215 LRRC31Q6UY01 552 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 PHLDB2Q86SQ0 1253 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms