RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 PDGFBP01127 241 aaPredicted RBP10.67□□□□□ -0.7
CASC3-204ENST00000474190 RHOQP17081 205 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 ERCC2P18074 760 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 CD72P21854 359 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 AMPD1P23109 780 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 MZF1P28698 734 aaPredicted RBP10.67□□□□□ -0.7
CASC3-204ENST00000474190 GALK1P51570 392 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 GAD2Q05329 585 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 LMAN2Q12907 356 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 SLC10A2Q12908 348 aaPredicted RBP10.67□□□□□ -0.7
CASC3-204ENST00000474190 MTA1Q13330 715 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 GEN1Q17RS7 908 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 ARL13BQ3SXY8 428 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 TMEM196Q5HYL7 178 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 EFHC2Q5JST6 749 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 FSTL4Q6MZW2 842 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 NYAP1Q6ZVC0 841 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 CHST9Q7L1S5 443 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 ADIPOR2Q86V24 386 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 VSIG1Q86XK7 387 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 YAF2Q8IY57 180 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 SLC35F6Q8N357 371 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 CPA6Q8N4T0 437 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 PLD5Q8N7P1 536 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 NAT16Q8N8M0 369 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 RTL3Q8N8U3 475 aaKnown RBP10.67□□□□□ -0.7
CASC3-204ENST00000474190 NETO2Q8NC67 525 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 HJURPQ8NCD3 748 aaPredicted RBP10.67□□□□□ -0.7
CASC3-204ENST00000474190 FIBINQ8TAL6 211 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 TBC1D31Q96DN5 1066 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 ZNF419Q96HQ0 510 aaPredicted RBP10.67□□□□□ -0.7
CASC3-204ENST00000474190 RPRD1AQ96P16 312 aaPredicted RBP10.67□□□□□ -0.7
CASC3-204ENST00000474190 BBS2Q9BXC9 721 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 LRRC19Q9H756 370 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 WNT16Q9UBV4 365 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 SLC12A6Q9UHW9 1150 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 SLC27A6Q9Y2P4 619 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 PIAS3Q9Y6X2 628 aa10.67□□□□□ -0.7
CASC3-204ENST00000474190 hCG_1818297A0A087WSY0 165 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 A0A1B0GVM2 712 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 TCRBV7S2A1N4TA0A589 114 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 TCAF2A6NFQ2 919 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 K7EQS6 105 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 ZSCAN12O43309 604 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 SPOPO43791 374 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 NRDCO43847 1150 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 CREB3O43889 395 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 LUC7L3O95232 432 aaKnown RBP10.66□□□□□ -0.7
CASC3-204ENST00000474190 PEX11BO96011 259 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 ADH1CP00326 375 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 KRT7P08729 469 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 EPHB2P29323 1055 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 PTPN7P35236 360 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 GJC1P36383 396 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 EIF2DP41214 584 aaKnown RBP10.66□□□□□ -0.7
CASC3-204ENST00000474190 PLK1P53350 603 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 CDH4P55283 916 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 CDH6P55285 790 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 STARD6P59095 220 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 HADHQ16836 314 aaKnown RBP10.66□□□□□ -0.7
CASC3-204ENST00000474190 ANO4Q32M45 955 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 FUT11Q495W5 492 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 ANKRD20A8PQ5CZ79 823 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 ACBD5Q5T8D3 534 aaPredicted RBP10.66□□□□□ -0.7
CASC3-204ENST00000474190 NCBP2-AS2Q69YL0 99 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 SLC9A4Q6AI14 798 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 TFAP2DQ7Z6R9 452 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 APCDD1Q8J025 514 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 UMODL1-AS1Q8N2C9 162 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 TXLNBQ8N3L3 684 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 TRIM58Q8NG06 486 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 EXD1Q8NHP7 514 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 RNF25Q96BH1 459 aaPredicted RBP10.66□□□□□ -0.7
CASC3-204ENST00000474190 MYO19Q96H55 970 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 RNF157Q96PX1 679 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 ZNF670Q9BS34 389 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 ZYG11BQ9C0D3 744 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 CD248Q9HCU0 757 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 STIM2Q9P246 746 aa10.66□□□□□ -0.7
CASC3-204ENST00000474190 RCOR3Q9P2K3 495 aaPredicted RBP10.66□□□□□ -0.7
CASC3-204ENST00000474190 CCDC66A2RUB6 948 aa10.65□□□□□ -0.7
CASC3-204ENST00000474190 EEF2KO00418 725 aaKnown RBP10.65□□□□□ -0.7
CASC3-204ENST00000474190 ENC1O14682 589 aa10.65□□□□□ -0.7
CASC3-204ENST00000474190 CLDN11O75508 207 aa10.65□□□□□ -0.7
CASC3-204ENST00000474190 KRT1P04264 644 aa10.65□□□□□ -0.7
CASC3-204ENST00000474190 ATP1A1P05023 1023 aaKnown RBP10.65□□□□□ -0.7
CASC3-204ENST00000474190 KRT10P13645 584 aa10.65□□□□□ -0.7
CASC3-204ENST00000474190 TNNT1P13805 278 aa10.65□□□□□ -0.7
CASC3-204ENST00000474190 GLULP15104 373 aa10.65□□□□□ -0.7
CASC3-204ENST00000474190 GLDCP23378 1020 aa10.65□□□□□ -0.7
CASC3-204ENST00000474190 TARSP26639 723 aaKnown RBP10.65□□□□□ -0.7
CASC3-204ENST00000474190 HTR7P34969 479 aa10.65□□□□□ -0.7
CASC3-204ENST00000474190 ACVRL1P37023 503 aa10.65□□□□□ -0.7
CASC3-204ENST00000474190 CSKP41240 450 aa10.65□□□□□ -0.7
CASC3-204ENST00000474190 KIR2DL1P43626 348 aaPredicted RBP10.65□□□□□ -0.7
CASC3-204ENST00000474190 NAP1L1P55209 391 aaKnown RBP10.65□□□□□ -0.7
CASC3-204ENST00000474190 AMPD2Q01433 879 aa10.65□□□□□ -0.7
CASC3-204ENST00000474190 PFKPQ01813 784 aa10.65□□□□□ -0.7
CASC3-204ENST00000474190 KLF1Q13351 362 aaPredicted RBP10.65□□□□□ -0.7
CASC3-204ENST00000474190 ZNF211Q13398 564 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms