RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 PAXBP1Q9Y5B6 917 aa19.53■□□□□ 0.72
PTCD3-210ENST00000473829 ZNF292O60281 2723 aa19.53■□□□□ 0.72
PTCD3-210ENST00000473829 NYNRINQ9P2P1 1898 aaKnown RBP19.53■□□□□ 0.72
PTCD3-210ENST00000473829 CBFA2T2O43439 604 aa19.52■□□□□ 0.72
PTCD3-210ENST00000473829 TPM3P06753 285 aa19.52■□□□□ 0.72
PTCD3-210ENST00000473829 DLDP09622 509 aaKnown RBP19.52■□□□□ 0.72
PTCD3-210ENST00000473829 GZMAP12544 262 aa19.52■□□□□ 0.72
PTCD3-210ENST00000473829 POLR2EP19388 210 aaKnown RBP19.52■□□□□ 0.72
PTCD3-210ENST00000473829 MZF1P28698 734 aaPredicted RBP19.52■□□□□ 0.72
PTCD3-210ENST00000473829 PLEKHG6Q3KR16 790 aa19.52■□□□□ 0.72
PTCD3-210ENST00000473829 FNDC3BQ53EP0 1204 aaKnown RBP19.52■□□□□ 0.72
PTCD3-210ENST00000473829 ALFQ53S48 1182 aa19.52■□□□□ 0.72
PTCD3-210ENST00000473829 LAIR1Q6GTX8 287 aa19.52■□□□□ 0.72
PTCD3-210ENST00000473829 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.52■□□□□ 0.72
PTCD3-210ENST00000473829 PGBD3Q8N328 593 aa19.52■□□□□ 0.72
PTCD3-210ENST00000473829 CCDC185Q8N715 623 aa19.52■□□□□ 0.72
PTCD3-210ENST00000473829 RUBCNQ92622 972 aa19.52■□□□□ 0.72
PTCD3-210ENST00000473829 VCPIP1Q96JH7 1222 aa19.52■□□□□ 0.72
PTCD3-210ENST00000473829 MRGPRX3Q96LB0 322 aa19.52■□□□□ 0.72
PTCD3-210ENST00000473829 MAGEB5Q9BZ81 275 aa19.52■□□□□ 0.72
PTCD3-210ENST00000473829 KIAA1522Q9P206 1035 aaPredicted RBP19.52■□□□□ 0.72
PTCD3-210ENST00000473829 NCDNQ9UBB6 729 aa19.52■□□□□ 0.72
PTCD3-210ENST00000473829 RAB23Q9ULC3 237 aa19.52■□□□□ 0.72
PTCD3-210ENST00000473829 ABCA7Q8IZY2 2146 aa19.51■□□□□ 0.71
PTCD3-210ENST00000473829 FTLP02792 175 aaPredicted RBP19.51■□□□□ 0.71
PTCD3-210ENST00000473829 SERPING1P05155 500 aa19.51■□□□□ 0.71
PTCD3-210ENST00000473829 P2RY2P41231 377 aa19.51■□□□□ 0.71
PTCD3-210ENST00000473829 ZNF143P52747 638 aaPredicted RBP19.51■□□□□ 0.71
PTCD3-210ENST00000473829 MAMLD1Q13495 774 aa19.51■□□□□ 0.71
PTCD3-210ENST00000473829 MAP7D1Q3KQU3 841 aa19.51■□□□□ 0.71
PTCD3-210ENST00000473829 PLK5Q496M5 336 aa19.51■□□□□ 0.71
PTCD3-210ENST00000473829 USP39Q53GS9 565 aaKnown RBP19.51■□□□□ 0.71
PTCD3-210ENST00000473829 SPECC1LQ69YQ0 1117 aa19.51■□□□□ 0.71
PTCD3-210ENST00000473829 PLEKHA7Q6IQ23 1121 aa19.51■□□□□ 0.71
PTCD3-210ENST00000473829 VSTM4Q8IW00 320 aa19.51■□□□□ 0.71
PTCD3-210ENST00000473829 CCDC117Q8IWD4 279 aaPredicted RBP19.51■□□□□ 0.71
PTCD3-210ENST00000473829 ALG14Q96F25 216 aa19.51■□□□□ 0.71
PTCD3-210ENST00000473829 MRGPRX1Q96LB2 322 aa19.51■□□□□ 0.71
PTCD3-210ENST00000473829 C1orf74Q96LT6 269 aa19.51■□□□□ 0.71
PTCD3-210ENST00000473829 HAPLN3Q96S86 360 aa19.51■□□□□ 0.71
PTCD3-210ENST00000473829 HINFPQ9BQA5 517 aa19.51■□□□□ 0.71
PTCD3-210ENST00000473829 MKRN2Q9H000 416 aaKnown RBP19.51■□□□□ 0.71
PTCD3-210ENST00000473829 DUSP15Q9H1R2 295 aaPredicted RBP19.51■□□□□ 0.71
PTCD3-210ENST00000473829 MTG2Q9H4K7 406 aa19.51■□□□□ 0.71
PTCD3-210ENST00000473829 TMEM51Q9NW97 253 aa19.51■□□□□ 0.71
PTCD3-210ENST00000473829 MPP6Q9NZW5 540 aa19.51■□□□□ 0.71
PTCD3-210ENST00000473829 ARHGAP20Q9P2F6 1191 aa19.51■□□□□ 0.71
PTCD3-210ENST00000473829 ADAMTS1Q9UHI8 967 aa19.51■□□□□ 0.71
PTCD3-210ENST00000473829 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.51■□□□□ 0.71
PTCD3-210ENST00000473829 SDK1Q7Z5N4 2213 aa19.51■□□□□ 0.71
PTCD3-210ENST00000473829 THADAQ6YHU6 1953 aa19.5■□□□□ 0.71
PTCD3-210ENST00000473829 IGLV3-10A0A075B6K4 115 aa19.5■□□□□ 0.71
PTCD3-210ENST00000473829 DRGXA6NNA5 263 aa19.5■□□□□ 0.71
PTCD3-210ENST00000473829 E9PAM4 449 aa19.5■□□□□ 0.71
PTCD3-210ENST00000473829 RTN2O75298 545 aa19.5■□□□□ 0.71
PTCD3-210ENST00000473829 ATP5BP06576 529 aaKnown RBP19.5■□□□□ 0.71
PTCD3-210ENST00000473829 EPHX1P07099 455 aa19.5■□□□□ 0.71
PTCD3-210ENST00000473829 ADRA1BP35368 520 aa19.5■□□□□ 0.71
PTCD3-210ENST00000473829 COPAP53621 1224 aa19.5■□□□□ 0.71
PTCD3-210ENST00000473829 ZNF252P-AS1Q0IIN9 211 aa19.5■□□□□ 0.71
PTCD3-210ENST00000473829 STARD3Q14849 445 aa19.5■□□□□ 0.71
PTCD3-210ENST00000473829 PPP1R2P3Q6NXS1 205 aa19.5■□□□□ 0.71
PTCD3-210ENST00000473829 ZC3H10Q96K80 434 aaKnown RBP19.5■□□□□ 0.71
PTCD3-210ENST00000473829 TRIM7Q9C029 511 aa19.5■□□□□ 0.71
PTCD3-210ENST00000473829 ISCUQ9H1K1 167 aa19.5■□□□□ 0.71
PTCD3-210ENST00000473829 MBD1Q9UIS9 605 aaPredicted RBP19.5■□□□□ 0.71
PTCD3-210ENST00000473829 PLA2G4CQ9UP65 541 aa19.5■□□□□ 0.71
PTCD3-210ENST00000473829 TNRC6BQ9UPQ9 1833 aaKnown RBP19.5■□□□□ 0.71
PTCD3-210ENST00000473829 FAM72CH0Y354 149 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 CLDN11O75508 207 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 ASLP04424 464 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 CDH4P55283 916 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 CAMK2GQ13555 558 aaPredicted RBP19.49■□□□□ 0.71
PTCD3-210ENST00000473829 FAM72AQ5TYM5 149 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 MANEALQ5VSG8 457 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 FAM72DQ6L9T8 149 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 DCUN1D2Q6PH85 259 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 KIAA1324Q6UXG2 1013 aaKnown RBP19.49■□□□□ 0.71
PTCD3-210ENST00000473829 TFAP2DQ7Z6R9 452 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 FAM72BQ86X60 149 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 CACUL1Q86Y37 369 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 ZNF653Q96CK0 615 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 CNPY3Q9BT09 278 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.49■□□□□ 0.71
PTCD3-210ENST00000473829 PARD6AQ9NPB6 346 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 PARVAQ9NVD7 372 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 ZNF212Q9UDV6 495 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 CNOT8Q9UFF9 292 aaKnown RBP19.49■□□□□ 0.71
PTCD3-210ENST00000473829 GMEB2Q9UKD1 530 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 NEU3Q9UQ49 428 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 ERVW-1Q9UQF0 538 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 TBC1D30Q9Y2I9 924 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 OR51B4Q9Y5P0 310 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 BZW2Q9Y6E2 419 aaKnown RBP19.49■□□□□ 0.71
PTCD3-210ENST00000473829 DMXL1Q9Y485 3027 aa19.49■□□□□ 0.71
PTCD3-210ENST00000473829 PTPRZ1P23471 2315 aaPredicted RBP19.48■□□□□ 0.71
PTCD3-210ENST00000473829 A0A087X0T9 212 aa19.48■□□□□ 0.71
PTCD3-210ENST00000473829 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.48■□□□□ 0.71
PTCD3-210ENST00000473829 SYNCRIPO60506 623 aaKnown RBP19.48■□□□□ 0.71
PTCD3-210ENST00000473829 SRGAP2O75044 1071 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms