RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 RFC4P35249 363 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 BMPR1AP36894 532 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 ARCN1P48444 511 aaKnown RBP6.23□□□□□ -1.41
RTF1-203ENST00000473214 VPS41P49754 854 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 NPY4RP50391 375 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 RBM5P52756 815 aaKnown RBP eCLIP6.23□□□□□ -1.41
RTF1-203ENST00000473214 CASP9P55211 416 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 TRA2BP62995 288 aaKnown RBP6.23□□□□□ -1.41
RTF1-203ENST00000473214 CYP4F8P98187 520 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 CD83Q01151 205 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 POU4F1Q01851 419 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 MGAT5Q09328 741 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 TRIM25Q14258 630 aaKnown RBP6.23□□□□□ -1.41
RTF1-203ENST00000473214 NEDD9Q14511 834 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 TTLL4Q14679 1199 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 NKG7Q16617 165 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 PROSER3Q2NL68 480 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 CCDC152Q4G0S7 254 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 METTL11BQ5VVY1 283 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 PRAMEF13Q5VWM6 474 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 LRSAM1Q6UWE0 723 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 OLFML1Q6UWY5 402 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 PACS1Q6VY07 963 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 SYT13Q7L8C5 426 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 ADGRA1Q86SQ6 560 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 HOOK3Q86VS8 718 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 CCDC13Q8IYE1 715 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 OR6B3Q8NGW1 331 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 ZNF507Q8TCN5 953 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 XAGE3Q8WTP9 111 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 CLPTM1LQ96KA5 538 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 RUFY1Q96T51 708 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 NAA11Q9BSU3 229 aaPredicted RBP6.23□□□□□ -1.41
RTF1-203ENST00000473214 PRDM14Q9GZV8 571 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 NACA2Q9H009 215 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 WNT8AQ9H1J5 351 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 PCED1AQ9H1Q7 454 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 FANCEQ9HB96 536 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 LTB4R2Q9NPC1 389 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 G6PC2Q9NQR9 355 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 INTS13Q9NVM9 706 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.23□□□□□ -1.41
RTF1-203ENST00000473214 CNOT7Q9UIV1 285 aaKnown RBP6.23□□□□□ -1.41
RTF1-203ENST00000473214 APPL1Q9UKG1 709 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 RPH3AQ9Y2J0 694 aaPredicted RBP6.23□□□□□ -1.41
RTF1-203ENST00000473214 ASB3Q9Y575 518 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 CLCA3PQ9Y6N3 262 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 SPATA31A3Q5VYP0 1347 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 NPHP3Q7Z494 1330 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 ADGRB2O60241 1585 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 CDC42BPGQ6DT37 1551 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 SHANK3Q9BYB0 1731 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 KDRP35968 1356 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 ST20-MTHFSA0A0A6YYL1 179 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 MYO1GB0I1T2 1018 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 POLR2DO15514 142 aaKnown RBP6.22□□□□□ -1.41
RTF1-203ENST00000473214 PRPF4O43172 522 aaKnown RBP eCLIP6.22□□□□□ -1.41
RTF1-203ENST00000473214 CA12O43570 354 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 ZNF254O75437 659 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 ALPPP05187 535 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 S100A9P06702 114 aaKnown RBP6.22□□□□□ -1.41
RTF1-203ENST00000473214 ALPPL2P10696 532 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 RARGP13631 454 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 DNAJB1P25685 340 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 CFPP27918 469 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 HOXC8P31273 242 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 CASP3P42574 277 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 DHPSP49366 369 aaPredicted RBP6.22□□□□□ -1.41
RTF1-203ENST00000473214 ALDH18A1P54886 795 aaKnown RBP6.22□□□□□ -1.41
RTF1-203ENST00000473214 ARHGAP8P85298 464 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 ACY1Q03154 408 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 RING1Q06587 406 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 CAPSQ13938 189 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 RPS6KA2Q15349 733 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 ADRM1Q16186 407 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 MAPKAPK3Q16644 382 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 HFEQ30201 348 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 MYLK3Q32MK0 819 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 KHDC1Q4VXA5 237 aaKnown RBP6.22□□□□□ -1.41
RTF1-203ENST00000473214 ZRANB3Q5FWF4 1079 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 RAB41Q5JT25 222 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 STXBP5Q5T5C0 1151 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 CYP4A22Q5TCH4 519 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 ANO7Q6IWH7 933 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 INO80CQ6PI98 192 aaPredicted RBP6.22□□□□□ -1.41
RTF1-203ENST00000473214 LINC00696Q6ZRV3 163 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 CENPQQ7L2Z9 268 aaPredicted RBP6.22□□□□□ -1.41
RTF1-203ENST00000473214 BNIPLQ7Z465 357 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 CNTN4Q8IWV2 1026 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 SP8Q8IXZ3 490 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 VGLL2Q8N8G2 317 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 DTWD2Q8NBA8 298 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 HIPK4Q8NE63 616 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 BRIX1Q8TDN6 353 aaKnown RBP6.22□□□□□ -1.41
RTF1-203ENST00000473214 KBTBD7Q8WVZ9 684 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 RAB24Q969Q5 203 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 MAML3Q96JK9 1138 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 C16orf92Q96LL3 132 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 KREMEN1Q96MU8 473 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 PTCHD1Q96NR3 888 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms