RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 PGAP3Q96FM1 320 aaPredicted RBP16.09■□□□□ 0.17
MRPL55-226ENST00000473066 PRMT1Q99873 361 aaKnown RBP16.09■□□□□ 0.17
MRPL55-226ENST00000473066 TKTL2Q9H0I9 626 aa16.09■□□□□ 0.17
MRPL55-226ENST00000473066 HSD3B7Q9H2F3 369 aa16.09■□□□□ 0.17
MRPL55-226ENST00000473066 USP36Q9P275 1121 aaKnown RBP16.09■□□□□ 0.17
MRPL55-226ENST00000473066 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.08■□□□□ 0.16
MRPL55-226ENST00000473066 SYCE3A1L190 88 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 RNASEH1O60930 286 aaKnown RBP16.08■□□□□ 0.16
MRPL55-226ENST00000473066 DNTTP04053 509 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 CFIP05156 583 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 CALB1P05937 261 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 PDGFRAP16234 1089 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 CHRNB2P17787 502 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 KCNA4P22459 653 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 MMP8P22894 467 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 RDXP35241 583 aaKnown RBP16.08■□□□□ 0.16
MRPL55-226ENST00000473066 FLT3P36888 993 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 GGCXP38435 758 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 CXCR3P49682 368 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 COPAP53621 1224 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 CENPCQ03188 943 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 SULT2A1Q06520 285 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 ZNF177Q13360 481 aaPredicted RBP16.08■□□□□ 0.16
MRPL55-226ENST00000473066 NUMA1Q14980 2115 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 PTPRNQ16849 979 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 FSCBQ5H9T9 825 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 WDR45BQ5MNZ6 344 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 STPG1Q5TH74 334 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 OTUD1Q5VV17 481 aaPredicted RBP16.08■□□□□ 0.16
MRPL55-226ENST00000473066 ZNF776Q68DI1 518 aaPredicted RBP16.08■□□□□ 0.16
MRPL55-226ENST00000473066 APTXQ7Z2E3 356 aaKnown RBP16.08■□□□□ 0.16
MRPL55-226ENST00000473066 DHX40Q8IX18 779 aaKnown RBP16.08■□□□□ 0.16
MRPL55-226ENST00000473066 KDM1BQ8NB78 822 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 CEP76Q8TAP6 659 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 TOE1Q96GM8 510 aaKnown RBP16.08■□□□□ 0.16
MRPL55-226ENST00000473066 LMLNQ96KR4 655 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 CD93Q9NPY3 652 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 ITM2CQ9NQX7 267 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 SUSD2Q9UGT4 822 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 EVLQ9UI08 416 aaPredicted RBP16.08■□□□□ 0.16
MRPL55-226ENST00000473066 SLC25A13Q9UJS0 675 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 INTS6Q9UL03 887 aaKnown RBP16.08■□□□□ 0.16
MRPL55-226ENST00000473066 ERVW-1Q9UQF0 538 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 HS3ST4Q9Y661 456 aa16.08■□□□□ 0.16
MRPL55-226ENST00000473066 LNP1A1A4G5 178 aa16.07■□□□□ 0.16
MRPL55-226ENST00000473066 ANKRD62A6NC57 917 aa16.07■□□□□ 0.16
MRPL55-226ENST00000473066 CLDN11O75508 207 aa16.07■□□□□ 0.16
MRPL55-226ENST00000473066 SERPINC1P01008 464 aa16.07■□□□□ 0.16
MRPL55-226ENST00000473066 DESP17661 470 aa16.07■□□□□ 0.16
MRPL55-226ENST00000473066 ITPKAP23677 461 aa16.07■□□□□ 0.16
MRPL55-226ENST00000473066 SDC4P31431 198 aa16.07■□□□□ 0.16
MRPL55-226ENST00000473066 TPMTP51580 245 aa16.07■□□□□ 0.16
MRPL55-226ENST00000473066 ECT2LQ008S8 904 aa16.07■□□□□ 0.16
MRPL55-226ENST00000473066 ZBTB16Q05516 673 aa16.07■□□□□ 0.16
MRPL55-226ENST00000473066 SFSWAPQ12872 951 aaKnown RBP16.07■□□□□ 0.16
MRPL55-226ENST00000473066 ARCQ7LC44 396 aa16.07■□□□□ 0.16
MRPL55-226ENST00000473066 SLC30A5Q8TAD4 765 aa16.07■□□□□ 0.16
MRPL55-226ENST00000473066 CFAP57Q96MR6 1250 aa16.07■□□□□ 0.16
MRPL55-226ENST00000473066 NUP58Q9BVL2 599 aa16.07■□□□□ 0.16
MRPL55-226ENST00000473066 SELENOOQ9BVL4 669 aa16.07■□□□□ 0.16
MRPL55-226ENST00000473066 GPR174Q9BXC1 333 aa16.07■□□□□ 0.16
MRPL55-226ENST00000473066 TMEM9BQ9NQ34 198 aa16.07■□□□□ 0.16
MRPL55-226ENST00000473066 RTN4Q9NQC3 1192 aaKnown RBP16.07■□□□□ 0.16
MRPL55-226ENST00000473066 PRSS16Q9NQE7 514 aa16.07■□□□□ 0.16
MRPL55-226ENST00000473066 ARHGEF38Q9NXL2 777 aa16.07■□□□□ 0.16
MRPL55-226ENST00000473066 ADAM22Q9P0K1 906 aa16.07■□□□□ 0.16
MRPL55-226ENST00000473066 FRYLO94915 3013 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 EDDM13A0A1B0GTR0 161 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 DCDC2BA2VCK2 349 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 PATE3B3GLJ2 98 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 GOLGA6L19H0YKK7 550 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 ADCY5O95622 1261 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 RHOCP08134 193 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 GNSP15586 552 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 TFE3P19532 575 aaPredicted RBP16.06■□□□□ 0.16
MRPL55-226ENST00000473066 ATXN3P54252 364 aaPredicted RBP16.06■□□□□ 0.16
MRPL55-226ENST00000473066 CDH4P55283 916 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 ATP11AP98196 1134 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 CDO1Q16878 200 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 DUOXA1Q1HG43 343 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 CLEC16AQ2KHT3 1053 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 HNRNPA1L2Q32P51 320 aaKnown RBP16.06■□□□□ 0.16
MRPL55-226ENST00000473066 ARL13BQ3SXY8 428 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 DAB2IPQ5VWQ8 1189 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 PPP1R2P3Q6NXS1 205 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 FAM124AQ86V42 546 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 FAM131BQ86XD5 332 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 APCDD1Q8J025 514 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 EMC1Q8N766 993 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 GANCQ8TET4 914 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 IGSF8Q969P0 613 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 NT5C3BQ969T7 300 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 AGPAT1Q99943 283 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 MUC3BQ9H195 1237 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 RXFP3Q9NSD7 469 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 WSB2Q9NYS7 404 aaPredicted RBP16.06■□□□□ 0.16
MRPL55-226ENST00000473066 TMEM59LQ9UK28 342 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 VPS28Q9UK41 221 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 PILRBQ9UKJ0 227 aa16.06■□□□□ 0.16
MRPL55-226ENST00000473066 MYO6Q9UM54 1294 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms