RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 TUBGCP2Q9BSJ2 902 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 SCNM1Q9BWG6 230 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 PABPC3Q9H361 631 aaKnown RBP15.8■□□□□ 0.12
VTI1A-203ENST00000472892 FAM204AQ9H8W3 233 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 DDIT4Q9NX09 232 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 SLCO3A1Q9UIG8 710 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 SLCO1B1Q9Y6L6 691 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 ITIH6Q6UXX5 1313 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 TTC34A8MYJ7 566 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 C1QTNF9BB2RNN3 333 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 GRAP2O75791 330 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 TRIM16O95361 564 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 ERBB2P04626 1255 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 C1QTNF9P0C862 333 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 PRKCSHP14314 528 aaPredicted RBP15.79■□□□□ 0.12
VTI1A-203ENST00000472892 ABCB4P21439 1286 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 AFF3P51826 1226 aaKnown RBP15.79■□□□□ 0.12
VTI1A-203ENST00000472892 BPIFB4P59827 614 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 SLC6A3Q01959 620 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 KCNMA1Q12791 1236 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 MTA1Q13330 715 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 TRIP6Q15654 476 aaKnown RBP15.79■□□□□ 0.12
VTI1A-203ENST00000472892 HLA-BQ31612 363 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 TTC39BQ5VTQ0 682 aaPredicted RBP15.79■□□□□ 0.12
VTI1A-203ENST00000472892 OR6B2Q6IFH4 312 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 DBX2Q6ZNG2 339 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 FAM183BPQ6ZVS7 135 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 DHX40Q8IX18 779 aaKnown RBP15.79■□□□□ 0.12
VTI1A-203ENST00000472892 CCAR2Q8N163 923 aaKnown RBP15.79■□□□□ 0.12
VTI1A-203ENST00000472892 C1orf131Q8NDD1 294 aaKnown RBP15.79■□□□□ 0.12
VTI1A-203ENST00000472892 ZNF397Q8NF99 534 aaPredicted RBP15.79■□□□□ 0.12
VTI1A-203ENST00000472892 CAMK1GQ96NX5 476 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 FAM129BQ96TA1 746 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 TMEM121BQ9BXQ6 578 aaPredicted RBP15.79■□□□□ 0.12
VTI1A-203ENST00000472892 ADAM33Q9BZ11 813 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 GAREM1Q9H706 876 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 IL21RQ9HBE5 538 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 NCKAP1Q9Y2A7 1128 aa15.79■□□□□ 0.12
VTI1A-203ENST00000472892 EDDM13A0A1B0GTR0 161 aa15.78■□□□□ 0.12
VTI1A-203ENST00000472892 A0A1B0GVT2 93 aa15.78■□□□□ 0.12
VTI1A-203ENST00000472892 FAM221BA6H8Z2 402 aa15.78■□□□□ 0.12
VTI1A-203ENST00000472892 RNASEH1O60930 286 aaKnown RBP15.78■□□□□ 0.12
VTI1A-203ENST00000472892 CER1O95813 267 aa15.78■□□□□ 0.12
VTI1A-203ENST00000472892 CD27P26842 260 aa15.78■□□□□ 0.12
VTI1A-203ENST00000472892 NOS2P35228 1153 aa15.78■□□□□ 0.12
VTI1A-203ENST00000472892 RDXP35241 583 aaKnown RBP15.78■□□□□ 0.12
VTI1A-203ENST00000472892 MATKP42679 507 aa15.78■□□□□ 0.12
VTI1A-203ENST00000472892 CSNK1EP49674 416 aaKnown RBP15.78■□□□□ 0.12
VTI1A-203ENST00000472892 SFSWAPQ12872 951 aaKnown RBP15.78■□□□□ 0.12
VTI1A-203ENST00000472892 PTPN20Q4JDL3 420 aa15.78■□□□□ 0.12
VTI1A-203ENST00000472892 CT47A1Q5JQC4 288 aaPredicted RBP15.78■□□□□ 0.12
VTI1A-203ENST00000472892 FBXL22Q6P050 247 aa15.78■□□□□ 0.12
VTI1A-203ENST00000472892 UNQ6494/PRO21346Q6UXR6 183 aa15.78■□□□□ 0.12
VTI1A-203ENST00000472892 SLC26A9Q7LBE3 791 aa15.78■□□□□ 0.12
VTI1A-203ENST00000472892 NAXDQ8IW45 347 aa15.78■□□□□ 0.12
VTI1A-203ENST00000472892 KDF1Q8NAX2 398 aaPredicted RBP15.78■□□□□ 0.12
VTI1A-203ENST00000472892 SNX19Q92543 992 aa15.78■□□□□ 0.12
VTI1A-203ENST00000472892 PTPRN2Q92932 1015 aa15.78■□□□□ 0.12
VTI1A-203ENST00000472892 RNF34Q969K3 372 aa15.78■□□□□ 0.12
VTI1A-203ENST00000472892 ORAI3Q9BRQ5 295 aa15.78■□□□□ 0.12
VTI1A-203ENST00000472892 FBXL12Q9NXK8 326 aa15.78■□□□□ 0.12
VTI1A-203ENST00000472892 DACH1Q9UI36 760 aa15.78■□□□□ 0.12
VTI1A-203ENST00000472892 NEUROG3Q9Y4Z2 214 aa15.78■□□□□ 0.12
VTI1A-203ENST00000472892 USP24Q9UPU5 2620 aa15.78■□□□□ 0.12
VTI1A-203ENST00000472892 FRYQ5TBA9 3013 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 SYNJ2BP-COX16A0A087WUM0 186 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 A0A1B0GVM2 712 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 TCAF2A6NFQ2 919 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 C10orf142B7Z368 130 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 HYAL3O43820 417 aaPredicted RBP15.77■□□□□ 0.12
VTI1A-203ENST00000472892 CBFA2T3O75081 653 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 FSBPO95073 299 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 IGHV4-34P06331 123 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 PNMA6AP0CW24 399 aaPredicted RBP15.77■□□□□ 0.12
VTI1A-203ENST00000472892 MZF1P28698 734 aaPredicted RBP15.77■□□□□ 0.12
VTI1A-203ENST00000472892 CDH5P33151 784 aaPredicted RBP15.77■□□□□ 0.12
VTI1A-203ENST00000472892 OXCT1P55809 520 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 SULT2A1Q06520 285 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 AUHQ13825 339 aaKnown RBP15.77■□□□□ 0.12
VTI1A-203ENST00000472892 DRAP1Q14919 205 aaPredicted RBP15.77■□□□□ 0.12
VTI1A-203ENST00000472892 CST6Q15828 149 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 ZNF423Q2M1K9 1284 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 C5orf22Q49AR2 442 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 RABGAP1LQ5R372 815 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 KLHDC7AQ5VTJ3 777 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 RNF219Q5W0B1 726 aaPredicted RBP15.77■□□□□ 0.12
VTI1A-203ENST00000472892 KIAA0895LQ68EN5 471 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 CXorf57Q6NSI4 855 aaKnown RBP15.77■□□□□ 0.12
VTI1A-203ENST00000472892 ZDHHC17Q8IUH5 632 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 MMAAQ8IVH4 418 aaKnown RBP15.77■□□□□ 0.12
VTI1A-203ENST00000472892 GANCQ8TET4 914 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 GATA6Q92908 595 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 IGSF8Q969P0 613 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 ALG14Q96F25 216 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 RPL10LQ96L21 214 aaKnown RBP15.77■□□□□ 0.12
VTI1A-203ENST00000472892 NEUROG2Q9H2A3 272 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 SYNCQ9H7C4 482 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 TM9SF3Q9HD45 589 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 PLCB1Q9NQ66 1216 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 TM7SF3Q9NS93 570 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms