RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 HLA-FP30511 346 aa20.57■□□□□ 0.88
SF1-213ENST00000472725 MAPKAPK2P49137 400 aa20.57■□□□□ 0.88
SF1-213ENST00000472725 PLK1P53350 603 aa20.57■□□□□ 0.88
SF1-213ENST00000472725 MRPS21P82921 87 aaKnown RBP20.57■□□□□ 0.88
SF1-213ENST00000472725 KDSRQ06136 332 aa20.57■□□□□ 0.88
SF1-213ENST00000472725 C6orf118Q5T5N4 469 aa20.57■□□□□ 0.88
SF1-213ENST00000472725 NAIF1Q69YI7 327 aaPredicted RBP20.57■□□□□ 0.88
SF1-213ENST00000472725 TPCN2Q8NHX9 752 aa20.57■□□□□ 0.88
SF1-213ENST00000472725 UCMAQ8WVF2 138 aa20.57■□□□□ 0.88
SF1-213ENST00000472725 LMLNQ96KR4 655 aa20.57■□□□□ 0.88
SF1-213ENST00000472725 CHRDQ9H2X0 955 aa20.57■□□□□ 0.88
SF1-213ENST00000472725 RCOR3Q9P2K3 495 aaPredicted RBP20.57■□□□□ 0.88
SF1-213ENST00000472725 GGA2Q9UJY4 613 aa20.57■□□□□ 0.88
SF1-213ENST00000472725 CLEC4EQ9ULY5 219 aa20.57■□□□□ 0.88
SF1-213ENST00000472725 SNX10Q9Y5X0 201 aa20.57■□□□□ 0.88
SF1-213ENST00000472725 MUC3AQ02505 3323 aa20.56■□□□□ 0.88
SF1-213ENST00000472725 WASH4PA8MWX3 477 aa20.56■□□□□ 0.88
SF1-213ENST00000472725 CHURC1-FNTBB4DL54 471 aa20.56■□□□□ 0.88
SF1-213ENST00000472725 FAM72CH0Y354 149 aa20.56■□□□□ 0.88
SF1-213ENST00000472725 BUB1BO60566 1050 aaPredicted RBP20.56■□□□□ 0.88
SF1-213ENST00000472725 GGCXP38435 758 aa20.56■□□□□ 0.88
SF1-213ENST00000472725 SSR1P43307 286 aaKnown RBP20.56■□□□□ 0.88
SF1-213ENST00000472725 FAM72AQ5TYM5 149 aa20.56■□□□□ 0.88
SF1-213ENST00000472725 FAM72DQ6L9T8 149 aa20.56■□□□□ 0.88
SF1-213ENST00000472725 TRMT11Q7Z4G4 463 aaKnown RBP20.56■□□□□ 0.88
SF1-213ENST00000472725 FAM72BQ86X60 149 aa20.56■□□□□ 0.88
SF1-213ENST00000472725 FAM71BQ8TC56 605 aa20.56■□□□□ 0.88
SF1-213ENST00000472725 ZWILCHQ9H900 591 aa20.56■□□□□ 0.88
SF1-213ENST00000472725 ABCB8Q9NUT2 735 aa20.56■□□□□ 0.88
SF1-213ENST00000472725 TMEM248Q9NWD8 314 aa20.56■□□□□ 0.88
SF1-213ENST00000472725 DLGAP2Q9P1A6 1054 aa20.56■□□□□ 0.88
SF1-213ENST00000472725 ALG6Q9Y672 507 aa20.56■□□□□ 0.88
SF1-213ENST00000472725 H3BRJ5 948 aa20.55■□□□□ 0.88
SF1-213ENST00000472725 EEF2KO00418 725 aaKnown RBP20.55■□□□□ 0.88
SF1-213ENST00000472725 EPHB2P29323 1055 aa20.55■□□□□ 0.88
SF1-213ENST00000472725 ETFBP38117 255 aa20.55■□□□□ 0.88
SF1-213ENST00000472725 ARL4AP40617 200 aa20.55■□□□□ 0.88
SF1-213ENST00000472725 NAP1L1P55209 391 aaKnown RBP20.55■□□□□ 0.88
SF1-213ENST00000472725 TPI1P60174 286 aa20.55■□□□□ 0.88
SF1-213ENST00000472725 LMAN2Q12907 356 aa20.55■□□□□ 0.88
SF1-213ENST00000472725 PDK2Q15119 407 aa20.55■□□□□ 0.88
SF1-213ENST00000472725 ALFQ53S48 1182 aa20.55■□□□□ 0.88
SF1-213ENST00000472725 CXorf57Q6NSI4 855 aaKnown RBP20.55■□□□□ 0.88
SF1-213ENST00000472725 RWDD4Q6NW29 188 aaKnown RBP20.55■□□□□ 0.88
SF1-213ENST00000472725 NLRP14Q86W24 1093 aa20.55■□□□□ 0.88
SF1-213ENST00000472725 VSIG1Q86XK7 387 aa20.55■□□□□ 0.88
SF1-213ENST00000472725 MAP7D3Q8IWC1 876 aa20.55■□□□□ 0.88
SF1-213ENST00000472725 RHOT1Q8IXI2 618 aa20.55■□□□□ 0.88
SF1-213ENST00000472725 PYROXD2Q8N2H3 581 aa20.55■□□□□ 0.88
SF1-213ENST00000472725 EZH1Q92800 747 aaPredicted RBP20.55■□□□□ 0.88
SF1-213ENST00000472725 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.55■□□□□ 0.88
SF1-213ENST00000472725 MPP6Q9NZW5 540 aa20.55■□□□□ 0.88
SF1-213ENST00000472725 ZNF212Q9UDV6 495 aa20.55■□□□□ 0.88
SF1-213ENST00000472725 SALL4Q9UJQ4 1053 aa20.55■□□□□ 0.88
SF1-213ENST00000472725 TFR2Q9UP52 801 aa20.55■□□□□ 0.88
SF1-213ENST00000472725 NEU3Q9UQ49 428 aa20.55■□□□□ 0.88
SF1-213ENST00000472725 DUSP10Q9Y6W6 482 aa20.55■□□□□ 0.88
SF1-213ENST00000472725 TRIOO75962 3097 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 CXorf51AA0A1B0GTR3 108 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 ILVBLA1L0T0 632 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 TMEM110-MUSTN1A8MSY1 372 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 TRIM24O15164 1050 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 PSTPIP1O43586 416 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 SPOPO43791 374 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 CREB3O43889 395 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 CNTN5O94779 1100 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 ASLP04424 464 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 ATP5BP06576 529 aaKnown RBP20.54■□□□□ 0.88
SF1-213ENST00000472725 HNRNPLP14866 589 aaKnown RBP eCLIP20.54■□□□□ 0.88
SF1-213ENST00000472725 TCF4P15884 667 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 COMTP21964 271 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 OR1E1P30953 314 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 KIR2DL1P43626 348 aaPredicted RBP20.54■□□□□ 0.88
SF1-213ENST00000472725 TAS2R40P59535 323 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 SULT2A1Q06520 285 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 MESP2Q0VG99 397 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 CA9Q16790 459 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 GEN1Q17RS7 908 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 KCNT1Q5JUK3 1230 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 DAB2IPQ5VWQ8 1189 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 DAAM2Q86T65 1068 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 CIR1Q86X95 450 aaPredicted RBP20.54■□□□□ 0.88
SF1-213ENST00000472725 SYCE1Q8N0S2 351 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 RTL3Q8N8U3 475 aaKnown RBP20.54■□□□□ 0.88
SF1-213ENST00000472725 WFDC5Q8TCV5 224 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 USP33Q8TEY7 942 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 TTC17Q96AE7 1141 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 ACDQ96AP0 544 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 KCTD15Q96SI1 283 aaPredicted RBP20.54■□□□□ 0.88
SF1-213ENST00000472725 ELOVL2Q9NXB9 296 aa20.54■□□□□ 0.88
SF1-213ENST00000472725 DDX56Q9NY93 547 aaKnown RBP20.54■□□□□ 0.88
SF1-213ENST00000472725 ZNF487B1APH4 448 aa20.53■□□□□ 0.88
SF1-213ENST00000472725 PRRT4C9JH25 899 aa20.53■□□□□ 0.88
SF1-213ENST00000472725 BUB1O43683 1085 aa20.53■□□□□ 0.88
SF1-213ENST00000472725 RNF40O75150 1001 aa20.53■□□□□ 0.88
SF1-213ENST00000472725 RHOCP08134 193 aa20.53■□□□□ 0.88
SF1-213ENST00000472725 POLR2EP19388 210 aaKnown RBP20.53■□□□□ 0.88
SF1-213ENST00000472725 AVPR2P30518 371 aa20.53■□□□□ 0.88
SF1-213ENST00000472725 CD70P32970 193 aa20.53■□□□□ 0.88
SF1-213ENST00000472725 IRAK1P51617 712 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms