RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-208ENST00000472230 ATF6P18850 670 aa18.79■□□□□ 0.6
GCFC2-208ENST00000472230 MLLT6P55198 1093 aaPredicted RBP18.79■□□□□ 0.6
GCFC2-208ENST00000472230 EFTUD2Q15029 972 aaKnown RBP eCLIP18.79■□□□□ 0.61e-11■■□□□ 12.9
GCFC2-208ENST00000472230 TMCO2Q7Z6W1 182 aaPredicted RBP18.79■□□□□ 0.6
GCFC2-208ENST00000472230 ATPAF2Q8N5M1 289 aa18.79■□□□□ 0.6
GCFC2-208ENST00000472230 MAML1Q92585 1016 aa18.79■□□□□ 0.6
GCFC2-208ENST00000472230 PAFAH2Q99487 392 aa18.79■□□□□ 0.6
GCFC2-208ENST00000472230 AFF4Q9UHB7 1163 aaKnown RBP18.79■□□□□ 0.6
GCFC2-208ENST00000472230 NEU3Q9UQ49 428 aa18.79■□□□□ 0.6
GCFC2-208ENST00000472230 CARNS1A5YM72 827 aa18.79■□□□□ 0.6
GCFC2-208ENST00000472230 TBX18O95935 607 aa18.79■□□□□ 0.6
GCFC2-208ENST00000472230 WDR5P61964 334 aaKnown RBP18.79■□□□□ 0.6
GCFC2-208ENST00000472230 ZNF33AQ06730 810 aa18.79■□□□□ 0.6
GCFC2-208ENST00000472230 ZNF534Q76KX8 674 aa18.79■□□□□ 0.6
GCFC2-208ENST00000472230 CMTR2Q8IYT2 770 aaKnown RBP18.79■□□□□ 0.6
GCFC2-208ENST00000472230 SLC39A11Q8N1S5 342 aa18.79■□□□□ 0.6
GCFC2-208ENST00000472230 HERC2P3Q9BVR0 1158 aa18.79■□□□□ 0.6
GCFC2-208ENST00000472230 UBE2OQ9C0C9 1292 aaKnown RBP18.79■□□□□ 0.6
GCFC2-208ENST00000472230 COL4A6Q14031 1691 aa18.78■□□□□ 0.6
GCFC2-208ENST00000472230 TMEM120BA0PK00 339 aa18.78■□□□□ 0.6
GCFC2-208ENST00000472230 TRIM43BA6NCK2 446 aa18.78■□□□□ 0.6
GCFC2-208ENST00000472230 FOXO6A8MYZ6 492 aa18.78■□□□□ 0.6
GCFC2-208ENST00000472230 HMBSP08397 361 aa18.78■□□□□ 0.6
GCFC2-208ENST00000472230 MAGEA3P43357 314 aa18.78■□□□□ 0.6
GCFC2-208ENST00000472230 TEX44Q53QW1 395 aa18.78■□□□□ 0.6
GCFC2-208ENST00000472230 PIK3R6Q5UE93 754 aa18.78■□□□□ 0.6
GCFC2-208ENST00000472230 LRRC8BQ6P9F7 803 aa18.78■□□□□ 0.6
GCFC2-208ENST00000472230 C14orf80Q86SX3 495 aa18.78■□□□□ 0.6
GCFC2-208ENST00000472230 TRIM43Q96BQ3 446 aaPredicted RBP18.78■□□□□ 0.6
GCFC2-208ENST00000472230 BTN2A3PQ96KV6 586 aa18.78■□□□□ 0.6
GCFC2-208ENST00000472230 AGAP3Q96P47 875 aa18.78■□□□□ 0.6
GCFC2-208ENST00000472230 CDK5RAP1Q96SZ6 601 aaKnown RBP18.78■□□□□ 0.6
GCFC2-208ENST00000472230 TTLL2Q9BWV7 592 aa18.78■□□□□ 0.6
GCFC2-208ENST00000472230 SPG21Q9NZD8 308 aa18.78■□□□□ 0.6
GCFC2-208ENST00000472230 SENP1Q9P0U3 644 aa18.78■□□□□ 0.6
GCFC2-208ENST00000472230 MYO18AQ92614 2054 aaKnown RBP18.78■□□□□ 0.6
GCFC2-208ENST00000472230 NUP205Q92621 2012 aa18.78■□□□□ 0.6
GCFC2-208ENST00000472230 TCRBV9S1A1TA0A576 114 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 NDUFAB1O14561 156 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 KIAA0355O15063 1070 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 ZBTB24O43167 697 aaPredicted RBP18.77■□□□□ 0.6
GCFC2-208ENST00000472230 TLR5O60602 858 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 CCNCP24863 283 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 KPNA1P52294 538 aaPredicted RBP18.77■□□□□ 0.6
GCFC2-208ENST00000472230 DSG1Q02413 1049 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 AGGF1Q8N302 714 aaeCLIP18.77■□□□□ 0.61e-8■■□□□ 11.6
GCFC2-208ENST00000472230 RTL3Q8N8U3 475 aaKnown RBP18.77■□□□□ 0.6
GCFC2-208ENST00000472230 PDZD8Q8NEN9 1154 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 DYDC1Q8WWB3 177 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 SIGLEC10Q96LC7 697 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 EBNA1BP2Q99848 306 aaKnown RBP18.77■□□□□ 0.6
GCFC2-208ENST00000472230 CLSTN3Q9BQT9 956 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 DONSONQ9NYP3 566 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 MPP6Q9NZW5 540 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 VANGL2Q9ULK5 521 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 GMNCA6NCL1 334 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 URODP06132 367 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 ACRP10323 421 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 CREB1P16220 341 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 ITGB8P26012 769 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 GRIA1P42261 906 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 PRPSAP1Q14558 356 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 TAF12Q16514 161 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 MS4A13Q5J8X5 152 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 TPGS2Q68CL5 300 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 CASC4Q6P4E1 433 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 TRABD2AQ86V40 505 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 ANKRD42Q8N9B4 389 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 ZNF461Q8TAF7 563 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 ZNF512Q96ME7 567 aaPredicted RBP18.77■□□□□ 0.6
GCFC2-208ENST00000472230 TMEM106CQ9BVX2 250 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 GBA3Q9H227 469 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 CCSER2Q9H7U1 834 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 NKIRAS1Q9NYS0 192 aa18.77■□□□□ 0.6
GCFC2-208ENST00000472230 MRPL42Q9Y6G3 142 aaKnown RBP18.77■□□□□ 0.6
GCFC2-208ENST00000472230 TRDMT1O14717 391 aaKnown RBP18.76■□□□□ 0.59
GCFC2-208ENST00000472230 JCHAINP01591 159 aa18.76■□□□□ 0.59
GCFC2-208ENST00000472230 ZDHHC11BP0C7U3 371 aa18.76■□□□□ 0.59
GCFC2-208ENST00000472230 GBP2P32456 591 aaPredicted RBP18.76■□□□□ 0.59
GCFC2-208ENST00000472230 SEC24CP53992 1094 aa18.76■□□□□ 0.59
GCFC2-208ENST00000472230 ZBTB17Q13105 803 aa18.76■□□□□ 0.59
GCFC2-208ENST00000472230 MTA1Q13330 715 aa18.76■□□□□ 0.59
GCFC2-208ENST00000472230 ADGRD1Q6QNK2 874 aa18.76■□□□□ 0.59
GCFC2-208ENST00000472230 MGARPQ8TDB4 240 aa18.76■□□□□ 0.59
GCFC2-208ENST00000472230 TSGA13Q96PP4 275 aa18.76■□□□□ 0.59
GCFC2-208ENST00000472230 SMC6Q96SB8 1091 aa18.76■□□□□ 0.59
GCFC2-208ENST00000472230 YME1L1Q96TA2 773 aa18.76■□□□□ 0.59
GCFC2-208ENST00000472230 ZYG11BQ9C0D3 744 aa18.76■□□□□ 0.59
GCFC2-208ENST00000472230 SLC39A8Q9C0K1 460 aa18.76■□□□□ 0.59
GCFC2-208ENST00000472230 NACA2Q9H009 215 aa18.76■□□□□ 0.59
GCFC2-208ENST00000472230 TRABDQ9H4I3 376 aa18.76■□□□□ 0.59
GCFC2-208ENST00000472230 CYP4F11Q9HBI6 524 aa18.76■□□□□ 0.59
GCFC2-208ENST00000472230 ARHGAP42A6NI28 874 aa18.76■□□□□ 0.59
GCFC2-208ENST00000472230 SDR42E2A6NKP2 422 aa18.76■□□□□ 0.59
GCFC2-208ENST00000472230 INHBAP08476 426 aa18.76■□□□□ 0.59
GCFC2-208ENST00000472230 CSH1P0DML2 217 aa18.76■□□□□ 0.59
GCFC2-208ENST00000472230 CSH2P0DML3 217 aa18.76■□□□□ 0.59
GCFC2-208ENST00000472230 HSPA8P11142 646 aaKnown RBP18.76■□□□□ 0.59
GCFC2-208ENST00000472230 ALDH1A3P47895 512 aa18.76■□□□□ 0.59
GCFC2-208ENST00000472230 SESN2P58004 480 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms