RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 TMEM119Q4V9L6 283 aa10.66□□□□□ -0.7
CDHR3-209ENST00000472116 CRTC1Q6UUV9 634 aa10.66□□□□□ -0.7
CDHR3-209ENST00000472116 RSRC2Q7L4I2 434 aaKnown RBP10.66□□□□□ -0.7
CDHR3-209ENST00000472116 RAB11FIP2Q7L804 512 aa10.66□□□□□ -0.7
CDHR3-209ENST00000472116 ADIPOR2Q86V24 386 aa10.66□□□□□ -0.7
CDHR3-209ENST00000472116 WDR49Q8IV35 697 aa10.66□□□□□ -0.7
CDHR3-209ENST00000472116 GPD1LQ8N335 351 aa10.66□□□□□ -0.7
CDHR3-209ENST00000472116 OR5B17Q8NGF7 314 aa10.66□□□□□ -0.7
CDHR3-209ENST00000472116 C9orf43Q8TAL5 461 aaPredicted RBP10.66□□□□□ -0.7
CDHR3-209ENST00000472116 GLMNQ92990 594 aa10.66□□□□□ -0.7
CDHR3-209ENST00000472116 JAKMIP2Q96AA8 810 aa10.66□□□□□ -0.7
CDHR3-209ENST00000472116 MIB2Q96AX9 1013 aa10.66□□□□□ -0.7
CDHR3-209ENST00000472116 FIZ1Q96SL8 496 aa10.66□□□□□ -0.7
CDHR3-209ENST00000472116 CALN1Q9BXU9 219 aa10.66□□□□□ -0.7
CDHR3-209ENST00000472116 IKZF4Q9H2S9 585 aa10.66□□□□□ -0.7
CDHR3-209ENST00000472116 KDM4CQ9H3R0 1056 aa10.66□□□□□ -0.7
CDHR3-209ENST00000472116 MTG2Q9H4K7 406 aa10.66□□□□□ -0.7
CDHR3-209ENST00000472116 MRPL44Q9H9J2 332 aaKnown RBP10.66□□□□□ -0.7
CDHR3-209ENST00000472116 EPB41L5Q9HCM4 733 aa10.66□□□□□ -0.7
CDHR3-209ENST00000472116 OSER1Q9NX31 292 aa10.66□□□□□ -0.7
CDHR3-209ENST00000472116 VPS4AQ9UN37 437 aa10.66□□□□□ -0.7
CDHR3-209ENST00000472116 TRPM6Q9BX84 2022 aa10.65□□□□□ -0.7
CDHR3-209ENST00000472116 A0A087X0B3 334 aa10.65□□□□□ -0.7
CDHR3-209ENST00000472116 ZNF233A6NK53 670 aa10.65□□□□□ -0.7
CDHR3-209ENST00000472116 H3BM21 787 aa10.65□□□□□ -0.7
CDHR3-209ENST00000472116 KIAA0391O15091 583 aaKnown RBP10.65□□□□□ -0.7
CDHR3-209ENST00000472116 SLC26A4O43511 780 aa10.65□□□□□ -0.7
CDHR3-209ENST00000472116 ASLP04424 464 aa10.65□□□□□ -0.7
CDHR3-209ENST00000472116 FAM200BP0CF97 657 aa10.65□□□□□ -0.7
CDHR3-209ENST00000472116 UGT1A5P35504 534 aa10.65□□□□□ -0.7
CDHR3-209ENST00000472116 NR0B2Q15466 257 aa10.65□□□□□ -0.7
CDHR3-209ENST00000472116 IL17AQ16552 155 aa10.65□□□□□ -0.7
CDHR3-209ENST00000472116 HNRNPA1L2Q32P51 320 aaKnown RBP10.65□□□□□ -0.7
CDHR3-209ENST00000472116 ZNF787Q6DD87 383 aa10.65□□□□□ -0.7
CDHR3-209ENST00000472116 GUSBP11Q6P575 273 aa10.65□□□□□ -0.7
CDHR3-209ENST00000472116 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.65□□□□□ -0.7
CDHR3-209ENST00000472116 ZNF720Q7Z2F6 126 aa10.65□□□□□ -0.7
CDHR3-209ENST00000472116 TRAPPC11Q7Z392 1133 aa10.65□□□□□ -0.7
CDHR3-209ENST00000472116 TICAM1Q8IUC6 712 aa10.65□□□□□ -0.7
CDHR3-209ENST00000472116 SRRM1Q8IYB3 904 aaKnown RBP10.65□□□□□ -0.7
CDHR3-209ENST00000472116 ZSWIM2Q8NEG5 633 aa10.65□□□□□ -0.7
CDHR3-209ENST00000472116 NAT6Q93015 286 aa10.65□□□□□ -0.7
CDHR3-209ENST00000472116 TMA16Q96EY4 203 aaKnown RBP10.65□□□□□ -0.7
CDHR3-209ENST00000472116 PCIF1Q9H4Z3 704 aa10.65□□□□□ -0.7
CDHR3-209ENST00000472116 ZNF768Q9H5H4 540 aaKnown RBP10.65□□□□□ -0.7
CDHR3-209ENST00000472116 NMUR1Q9HB89 426 aa10.65□□□□□ -0.7
CDHR3-209ENST00000472116 ZNF71Q9NQZ8 489 aaPredicted RBP10.65□□□□□ -0.7
CDHR3-209ENST00000472116 DNAJC28Q9NX36 388 aa10.65□□□□□ -0.7
CDHR3-209ENST00000472116 CYTH4Q9UIA0 394 aa10.65□□□□□ -0.7
CDHR3-209ENST00000472116 LY6G6EA0A0G2JKS1 128 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 EDDM13A0A1B0GTR0 161 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 TARSL2A2RTX5 802 aaKnown RBP10.64□□□□□ -0.71
CDHR3-209ENST00000472116 VWA3AA6NCI4 1184 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 NVLO15381 856 aaKnown RBP10.64□□□□□ -0.71
CDHR3-209ENST00000472116 NEBLO76041 1014 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 IL1BP01584 269 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 GIMD1P0DJR0 217 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 CCDC130P13994 396 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 TNNI1P19237 187 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 UBA7P41226 1012 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 CD97P48960 835 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 L1TD1Q5T7N2 865 aaKnown RBP10.64□□□□□ -0.71
CDHR3-209ENST00000472116 PAQR9Q6ZVX9 377 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 SFR1Q86XK3 245 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 CCDC117Q8IWD4 279 aaPredicted RBP10.64□□□□□ -0.71
CDHR3-209ENST00000472116 FUKQ8N0W3 1084 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 ZNF276Q8N554 614 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 AADATQ8N5Z0 425 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 EFCAB3Q8N7B9 438 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.64□□□□□ -0.71
CDHR3-209ENST00000472116 ZMIZ2Q8NF64 920 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 SLC2A14Q8TDB8 520 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 HTR3CQ8WXA8 447 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 SYAP1Q96A49 352 aaPredicted RBP10.64□□□□□ -0.71
CDHR3-209ENST00000472116 PLD4Q96BZ4 506 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 IFT43Q96FT9 208 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 IL12RB2Q99665 862 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 SMOQ99835 787 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 KRTAP3-3Q9BYR6 98 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 KRTAP3-2Q9BYR7 98 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 CSNK1G1Q9HCP0 422 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 CUEDC1Q9NWM3 386 aaPredicted RBP10.64□□□□□ -0.71
CDHR3-209ENST00000472116 CLIC5Q9NZA1 410 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 MARCH2Q9P0N8 246 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 PISDQ9UG56 409 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 CEP83Q9Y592 693 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 U3KQA8 63 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 SDK2Q58EX2 2172 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 CRYBG3Q68DQ2 2970 aa10.64□□□□□ -0.71
CDHR3-209ENST00000472116 EME2A4GXA9 379 aaPredicted RBP10.63□□□□□ -0.71
CDHR3-209ENST00000472116 MUSKO15146 869 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 SLC7A4O43246 635 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 MTSS1O43312 755 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 BEST1O76090 585 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 GCNT3O95395 438 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 DLATP10515 647 aaKnown RBP10.63□□□□□ -0.71
CDHR3-209ENST00000472116 DCTP40126 519 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 ATP1A2P50993 1020 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 KLRB1Q12918 225 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 MCM6Q14566 821 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms