RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 ZNF366Q8N895 744 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 CENPIQ92674 756 aaPredicted RBP9.44□□□□□ -0.9
SYN3-211ENST00000472027 VCPIP1Q96JH7 1222 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 SPACA7Q96KW9 195 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 HAPLN3Q96S86 360 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 XPO4Q9C0E2 1151 aaKnown RBP9.44□□□□□ -0.9
SYN3-211ENST00000472027 MKRN2Q9H000 416 aaKnown RBP9.44□□□□□ -0.9
SYN3-211ENST00000472027 PRDM16Q9HAZ2 1276 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 PARD6AQ9NPB6 346 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 SUN2Q9UH99 717 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 MBD1Q9UIS9 605 aaPredicted RBP9.44□□□□□ -0.9
SYN3-211ENST00000472027 CAPN11Q9UMQ6 739 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 IGHV1OR15-9A0A0B4J2B8 117 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 DDX3XO00571 662 aaKnown RBP eCLIP9.43□□□□□ -0.9
SYN3-211ENST00000472027 SRGAP2O75044 1071 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 LRP3O75074 770 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 CLDN11O75508 207 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 CNTN5O94779 1100 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 EPN2O95208 641 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 FTLP02792 175 aaPredicted RBP9.43□□□□□ -0.9
SYN3-211ENST00000472027 GZMAP12544 262 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 GPD1P21695 349 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 ADRA1BP35368 520 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 CTSOP43234 321 aaPredicted RBP9.43□□□□□ -0.9
SYN3-211ENST00000472027 NUMBP49757 651 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 CDH4P55283 916 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 OXCT1P55809 520 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 HDAC4P56524 1084 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 ST8SIA6P61647 398 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 RPL7AP62424 266 aaKnown RBP9.43□□□□□ -0.9
SYN3-211ENST00000472027 ZBED6P86452 979 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 CAMK2GQ13555 558 aaPredicted RBP9.43□□□□□ -0.9
SYN3-211ENST00000472027 CCDC6Q16204 474 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 PLEKHG6Q3KR16 790 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 ARL13BQ3SXY8 428 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 ALFQ53S48 1182 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 PPP1R15BQ5SWA1 713 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 ARTNQ5T4W7 220 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 PMS2CLQ68D20 193 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 CXorf57Q6NSI4 855 aaKnown RBP9.43□□□□□ -0.9
SYN3-211ENST00000472027 KIAA1324Q6UXG2 1013 aaKnown RBP9.43□□□□□ -0.9
SYN3-211ENST00000472027 LRRC31Q6UY01 552 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 LPCAT2Q7L5N7 544 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 STRADAQ7RTN6 431 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 METTL3Q86U44 580 aaKnown RBP9.43□□□□□ -0.9
SYN3-211ENST00000472027 DNAAF5Q86Y56 855 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 TMEFF1Q8IYR6 380 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 RNF214Q8ND24 703 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 OR52K2Q8NGK3 314 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 FAM172AQ8WUF8 416 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 PRCCQ92733 491 aaPredicted RBP9.43□□□□□ -0.9
SYN3-211ENST00000472027 SYN2Q92777 582 aaPredicted RBP9.43□□□□□ -0.9
SYN3-211ENST00000472027 IQCDQ96DY2 449 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 ALG14Q96F25 216 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 SIPA1Q96FS4 1042 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 MYO19Q96H55 970 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 MRGPRX3Q96LB0 322 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 MTG2Q9H4K7 406 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 CD93Q9NPY3 652 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 PRSS16Q9NQE7 514 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 ITM2CQ9NQX7 267 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 SEMA4GQ9NTN9 838 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 USP18Q9UMW8 372 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 CYP8B1Q9UNU6 501 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 ERVW-1Q9UQF0 538 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 TBC1D30Q9Y2I9 924 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 PCDHGA5Q9Y5G8 931 aa9.43□□□□□ -0.9
SYN3-211ENST00000472027 ITIH6Q6UXX5 1313 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 IGLV3-10A0A075B6K4 115 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 ANKRD62A6NC57 917 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 E9PAM4 449 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 RTN2O75298 545 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 GYPCP04921 128 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 TPM3P06753 285 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 SRPRAP08240 638 aaKnown RBP9.42□□□□□ -0.9
SYN3-211ENST00000472027 DHPSP49366 369 aaPredicted RBP9.42□□□□□ -0.9
SYN3-211ENST00000472027 ZNF143P52747 638 aaPredicted RBP9.42□□□□□ -0.9
SYN3-211ENST00000472027 ECT2LQ008S8 904 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 CREB5Q02930 508 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 MAMLD1Q13495 774 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 CSRP2Q16527 193 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 SPDYCQ5MJ68 293 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 RNF219Q5W0B1 726 aaPredicted RBP9.42□□□□□ -0.9
SYN3-211ENST00000472027 HGSNATQ68CP4 663 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 DCUN1D2Q6PH85 259 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 SLC36A4Q6YBV0 504 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 DEFB119Q8N690 84 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 KDM1BQ8NB78 822 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 OR2T3Q8NH03 318 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 RPL10LQ96L21 214 aaKnown RBP9.42□□□□□ -0.9
SYN3-211ENST00000472027 MCEEQ96PE7 176 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 PPP1R9BQ96SB3 815 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 FEM1AQ9BSK4 669 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.42□□□□□ -0.9
SYN3-211ENST00000472027 MAGEB5Q9BZ81 275 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 OSBPL2Q9H1P3 480 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 PARVAQ9NVD7 372 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 MPP6Q9NZW5 540 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 PPARGC1AQ9UBK2 798 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms