RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 PPTC7Q8NI37 304 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 LRRC40Q9H9A6 602 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 CA14Q9ULX7 337 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 MYO3AQ8NEV4 1616 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 O00370 1275 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 AKAP10O43572 662 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 FTH1P02794 183 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 HNF4AP41235 474 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 MPPE1Q53F39 396 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 C2orf27AQ580R0 203 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 WDR45BQ5MNZ6 344 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 APOBEC3HQ6NTF7 200 aaKnown RBP8.75□□□□□ -1.01
CD47-204ENST00000471694 GALNT13Q8IUC8 556 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 LIX1Q8N485 282 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 ATOH1Q92858 354 aaPredicted RBP8.75□□□□□ -1.01
CD47-204ENST00000471694 BTBD7Q9P203 1132 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 COLEC10Q9Y6Z7 277 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 GRID2IPA4D2P6 1211 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 FPGTO14772 594 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 SCAMP1O15126 338 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 HPCAL1P37235 193 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 GPR15P49685 360 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 NME5P56597 212 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 OC90Q02509 493 aaPredicted RBP8.75□□□□□ -1.01
CD47-204ENST00000471694 MMRN1Q13201 1228 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 CRY1Q16526 586 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 GDF6Q6KF10 455 aaPredicted RBP8.75□□□□□ -1.01
CD47-204ENST00000471694 DENND1BQ6P3S1 775 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 C3orf62Q6ZUJ4 267 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 LENG1Q96BZ8 264 aaPredicted RBP8.75□□□□□ -1.01
CD47-204ENST00000471694 RNF186Q9NXI6 227 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 MRTO4Q9UKD2 239 aaKnown RBP8.75□□□□□ -1.01
CD47-204ENST00000471694 PTCH2Q9Y6C5 1203 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 PHLPP1O60346 1717 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 VSTM5A8MXK1 200 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 SCN2BO60939 215 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 PHF2O75151 1096 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 PLEKP08567 350 aaPredicted RBP8.75□□□□□ -1.01
CD47-204ENST00000471694 ANO5Q75V66 913 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 CYP4Z2PQ8N1L4 340 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 TBL1YQ9BQ87 522 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 POPDC2Q9HBU9 364 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 H0Y858 1186 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 WDR47O94967 919 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 ITGAVP06756 1048 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 NR1D1P20393 614 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 MAPK8P45983 427 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 BLKP51451 505 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 GAD2Q05329 585 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 SNCBQ16143 134 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 CNKSR3Q6P9H4 555 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 KREMEN2Q8NCW0 462 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 GPT2Q8TD30 523 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 KLRG1Q96E93 195 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 BPIFA1Q9NP55 256 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 PALMDQ9NP74 551 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 IMPAD1Q9NX62 359 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 CAB39Q9Y376 341 aaPredicted RBP8.75□□□□□ -1.01
CD47-204ENST00000471694 FAM205AQ6ZU69 1335 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 MCIDASD6RGH6 385 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 SLC25A14O95258 325 aaPredicted RBP8.75□□□□□ -1.01
CD47-204ENST00000471694 ABRQ12979 859 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 RFX8Q6ZV50 586 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 SCUBE3Q8IX30 993 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 LEMD2Q8NC56 503 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 SPATA9Q9BWV2 254 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 GPAMQ9HCL2 828 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 DDX4Q9NQI0 724 aaKnown RBP8.75□□□□□ -1.01
CD47-204ENST00000471694 ZMYM5Q9UJ78 669 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 GTF3C4Q9UKN8 822 aa8.75□□□□□ -1.01
CD47-204ENST00000471694 MRPS33Q9Y291 106 aaKnown RBP8.75□□□□□ -1.01
CD47-204ENST00000471694 SLC31A1O15431 190 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 DGKIO75912 1065 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 ITPKBP27987 946 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 POU1F1P28069 291 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 RPP38P78345 283 aaKnown RBP8.74□□□□□ -1.01
CD47-204ENST00000471694 C2CD6Q53TS8 623 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 ZDHHC17Q8IUH5 632 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 PPIL6Q8IXY8 311 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 DEFB106AQ8N104 65 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 ATP6V1C2Q8NEY4 427 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 ASB8Q9H765 288 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 DNAJC28Q9NX36 388 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 GNPTGQ9UJJ9 305 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 FBXO2Q9UK22 296 aaPredicted RBP8.74□□□□□ -1.01
CD47-204ENST00000471694 USP20Q9Y2K6 914 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 KRT6AP02538 564 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 CATP04040 527 aaKnown RBP8.74□□□□□ -1.01
CD47-204ENST00000471694 KRT6BP04259 564 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 MAP2K2P36507 400 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 GLRBP48167 497 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 KRT6CP48668 564 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 E2F4Q16254 413 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 COLGALT1Q8NBJ5 622 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 INPP5DQ92835 1189 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 FEM1CQ96JP0 617 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 SEZ6LQ9BYH1 1024 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 CEP41Q9BYV8 373 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 RANBP17Q9H2T7 1088 aaKnown RBP8.74□□□□□ -1.01
CD47-204ENST00000471694 NEK6Q9HC98 313 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms