RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 DNAJC24Q6P3W2 148 aa12.79□□□□□ -0.36
LINC00888-202ENST00000471496 FAM131BQ86XD5 332 aa12.79□□□□□ -0.36
LINC00888-202ENST00000471496 ZNF513Q8N8E2 541 aaPredicted RBP12.79□□□□□ -0.36
LINC00888-202ENST00000471496 FIBINQ8TAL6 211 aa12.79□□□□□ -0.36
LINC00888-202ENST00000471496 RNF34Q969K3 372 aa12.79□□□□□ -0.36
LINC00888-202ENST00000471496 FAM126AQ9BYI3 521 aaPredicted RBP12.79□□□□□ -0.36
LINC00888-202ENST00000471496 ABCB8Q9NUT2 735 aa12.79□□□□□ -0.36
LINC00888-202ENST00000471496 ZSCAN32Q9NX65 697 aa12.79□□□□□ -0.36
LINC00888-202ENST00000471496 STIM2Q9P246 746 aa12.79□□□□□ -0.36
LINC00888-202ENST00000471496 SLC12A6Q9UHW9 1150 aa12.79□□□□□ -0.36
LINC00888-202ENST00000471496 INTS6Q9UL03 887 aaKnown RBP12.79□□□□□ -0.36
LINC00888-202ENST00000471496 SNX10Q9Y5X0 201 aa12.79□□□□□ -0.36
LINC00888-202ENST00000471496 CHD5Q8TDI0 1954 aa12.79□□□□□ -0.36
LINC00888-202ENST00000471496 LCE2BO14633 110 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 LUC7L3O95232 432 aaKnown RBP12.78□□□□□ -0.36
LINC00888-202ENST00000471496 GPD1P21695 349 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 SDC4P31431 198 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 PXNP49023 591 aaPredicted RBP12.78□□□□□ -0.36
LINC00888-202ENST00000471496 FNTBP49356 437 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 ZNF252P-AS1Q0IIN9 211 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 CDO1Q16878 200 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 ASTE1Q2TB18 679 aaPredicted RBP12.78□□□□□ -0.36
LINC00888-202ENST00000471496 PPP1R2P3Q6NXS1 205 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 STRADAQ7RTN6 431 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 ANKS1BQ7Z6G8 1248 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 CIR1Q86X95 450 aaPredicted RBP12.78□□□□□ -0.36
LINC00888-202ENST00000471496 DRC7Q8IY82 874 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 SORCS1Q8WY21 1168 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 MCEEQ96PE7 176 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 HHIPQ96QV1 700 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 MAGEB5Q9BZ81 275 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 ELOVL2Q9NXB9 296 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 NYNRINQ9P2P1 1898 aaKnown RBP12.78□□□□□ -0.36
LINC00888-202ENST00000471496 GGA2Q9UJY4 613 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 VANGL2Q9ULK5 521 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 SLC8A2Q9UPR5 921 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 PCDHGA2Q9Y5H1 932 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 A0A1W2PQF6 199 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 WASH3PC4AMC7 463 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 F5H5T6 163 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 CCP110O43303 1012 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 MFAP3LO75121 409 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 PABPC1P11940 636 aaKnown RBP12.78□□□□□ -0.36
LINC00888-202ENST00000471496 NTSR1P30989 418 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 ZNF143P52747 638 aaPredicted RBP12.78□□□□□ -0.36
LINC00888-202ENST00000471496 LMAN2Q12907 356 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 MTA1Q13330 715 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 EIF4HQ15056 248 aaKnown RBP12.78□□□□□ -0.36
LINC00888-202ENST00000471496 FUT11Q495W5 492 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 HEATR6Q6AI08 1181 aaKnown RBP12.78□□□□□ -0.36
LINC00888-202ENST00000471496 CXorf57Q6NSI4 855 aaKnown RBP12.78□□□□□ -0.36
LINC00888-202ENST00000471496 SND1Q7KZF4 910 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC00888-202ENST00000471496 WDR5BQ86VZ2 330 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 RASSF3Q86WH2 238 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 MFN1Q8IWA4 741 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 CCAR2Q8N163 923 aaKnown RBP12.78□□□□□ -0.36
LINC00888-202ENST00000471496 CAMKK1Q8N5S9 505 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 OR8K1Q8NGG5 319 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 OR52K2Q8NGK3 314 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 FAM172AQ8WUF8 416 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 C1orf74Q96LT6 269 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 HAPLN3Q96S86 360 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 GABRG3Q99928 467 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 TRIM7Q9C029 511 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 TRIM5Q9C035 493 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 SIK2Q9H0K1 926 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 ABHD10Q9NUJ1 306 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 PARVAQ9NVD7 372 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 TMEM51Q9NW97 253 aa12.78□□□□□ -0.36
LINC00888-202ENST00000471496 THAP10Q9P2Z0 257 aaPredicted RBP12.78□□□□□ -0.36
LINC00888-202ENST00000471496 SPAG17Q6Q759 2223 aa12.77□□□□□ -0.36
LINC00888-202ENST00000471496 ZFHX2Q9C0A1 2572 aaPredicted RBP12.77□□□□□ -0.36
LINC00888-202ENST00000471496 IGLV3-10A0A075B6K4 115 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 CCDC163A0A0D9SF12 145 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 TMEM191CA6NGB0 347 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 DRGXA6NNA5 263 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 CNTN5O94779 1100 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 ADRA1BP35368 520 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 EIF4A3P38919 411 aaKnown RBP12.77□□□□□ -0.37
LINC00888-202ENST00000471496 IL12RB1P42701 662 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 WASP42768 502 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 NRLP54845 237 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 ADKP55263 362 aaKnown RBP12.77□□□□□ -0.37
LINC00888-202ENST00000471496 ZNF234Q14588 700 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 PTPRNQ16849 979 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 ALFQ53S48 1182 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 EOGTQ5NDL2 527 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 KIAA1211LQ6NV74 962 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 CHST9Q7L1S5 443 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 RETREG3Q86VR2 466 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 LONP2Q86WA8 852 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 AHI1Q8N157 1196 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 CARNMT1Q8N4J0 409 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 ARFGAP1Q8N6T3 406 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 CCDC185Q8N715 623 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 WFIKKN2Q8TEU8 576 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 FAM122AQ96E09 287 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 CHP1Q99653 195 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 CNPY3Q9BT09 278 aa12.77□□□□□ -0.37
LINC00888-202ENST00000471496 CACNA2D2Q9NY47 1150 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms