RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 MYD88Q99836 296 aa6.27□□□□□ -1.41
CCDC39-202ENST00000471307 PHTF1Q9UMS5 762 aa6.27□□□□□ -1.41
CCDC39-202ENST00000471307 DENND4BO75064 1496 aaPredicted RBP6.27□□□□□ -1.41
CCDC39-202ENST00000471307 ZNF518AQ6AHZ1 1483 aa6.27□□□□□ -1.41
CCDC39-202ENST00000471307 MAST1Q9Y2H9 1570 aa6.27□□□□□ -1.41
CCDC39-202ENST00000471307 CROCC2H7BZ55 1655 aa6.26□□□□□ -1.41
CCDC39-202ENST00000471307 NAIPQ13075 1403 aa6.26□□□□□ -1.41
CCDC39-202ENST00000471307 A0A0G2JK05 382 aa6.26□□□□□ -1.41
CCDC39-202ENST00000471307 C3orf70A6NLC5 250 aaPredicted RBP6.26□□□□□ -1.41
CCDC39-202ENST00000471307 PCDH17O14917 1159 aa6.26□□□□□ -1.41
CCDC39-202ENST00000471307 NKX2-8O15522 239 aa6.26□□□□□ -1.41
CCDC39-202ENST00000471307 PPP6R2O75170 966 aa6.26□□□□□ -1.41
CCDC39-202ENST00000471307 EPN2O95208 641 aa6.26□□□□□ -1.41
CCDC39-202ENST00000471307 SYF2O95926 243 aaKnown RBP6.26□□□□□ -1.41
CCDC39-202ENST00000471307 BTKQ06187 659 aa6.26□□□□□ -1.41
CCDC39-202ENST00000471307 INPP5JQ15735 1006 aaPredicted RBP6.26□□□□□ -1.41
CCDC39-202ENST00000471307 DGKKQ5KSL6 1271 aa6.26□□□□□ -1.41
CCDC39-202ENST00000471307 CCSAPQ6IQ19 270 aaPredicted RBP6.26□□□□□ -1.41
CCDC39-202ENST00000471307 SLC39A5Q6ZMH5 540 aa6.26□□□□□ -1.41
CCDC39-202ENST00000471307 RFX8Q6ZV50 586 aa6.26□□□□□ -1.41
CCDC39-202ENST00000471307 SLC22A17Q8WUG5 538 aa6.26□□□□□ -1.41
CCDC39-202ENST00000471307 WDR60Q8WVS4 1066 aa6.26□□□□□ -1.41
CCDC39-202ENST00000471307 LYZL4Q96KX0 146 aa6.26□□□□□ -1.41
CCDC39-202ENST00000471307 GPR78Q96P69 363 aa6.26□□□□□ -1.41
CCDC39-202ENST00000471307 ARNT2Q9HBZ2 717 aa6.26□□□□□ -1.41
CCDC39-202ENST00000471307 THSD1Q9NS62 852 aa6.26□□□□□ -1.41
CCDC39-202ENST00000471307 PPRC1Q5VV67 1664 aaKnown RBP6.26□□□□□ -1.41
CCDC39-202ENST00000471307 POGZQ7Z3K3 1410 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 LOC105369274A0A096LPK9 316 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 LOC102723532A0A0G2JNH3 316 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 PRC1O43663 620 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 ZC3H11AO75152 810 aaKnown RBP eCLIP6.25□□□□□ -1.41
CCDC39-202ENST00000471307 CNTN5O94779 1100 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 ANXA6P08133 673 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 IGFBP2P18065 325 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 TGM2P21980 687 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 TKTP29401 623 aaKnown RBP6.25□□□□□ -1.41
CCDC39-202ENST00000471307 CCKARP32238 428 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 TLE3Q04726 772 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 PGM5Q15124 567 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 LRIG3Q6UXM1 1119 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 TRAPPC11Q7Z392 1133 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 TRABD2AQ86V40 505 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 OR4N4Q8N0Y3 316 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 DEPTORQ8TB45 409 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 SLC25A28Q96A46 364 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 TNIP3Q96KP6 325 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 WDR83Q9BRX9 315 aaKnown RBP6.25□□□□□ -1.41
CCDC39-202ENST00000471307 ABHD14AQ9BUJ0 271 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 FZD3Q9NPG1 666 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 RAB3GAP2Q9H2M9 1393 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 MLH3Q9UHC1 1453 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 ADGBQ8N7X0 1667 aa6.25□□□□□ -1.41
CCDC39-202ENST00000471307 KIF15Q9NS87 1388 aa6.24□□□□□ -1.41
CCDC39-202ENST00000471307 DPPA5A6NC42 116 aa6.24□□□□□ -1.41
CCDC39-202ENST00000471307 NDUFB8O95169 186 aa6.24□□□□□ -1.41
CCDC39-202ENST00000471307 NPPBP16860 134 aa6.24□□□□□ -1.41
CCDC39-202ENST00000471307 THBS3P49746 956 aa6.24□□□□□ -1.41
CCDC39-202ENST00000471307 ALDH18A1P54886 795 aaKnown RBP6.24□□□□□ -1.41
CCDC39-202ENST00000471307 SLC37A1P57057 533 aa6.24□□□□□ -1.41
CCDC39-202ENST00000471307 AAK1Q2M2I8 961 aa6.24□□□□□ -1.41
CCDC39-202ENST00000471307 TMEM88Q6PEY1 159 aa6.24□□□□□ -1.41
CCDC39-202ENST00000471307 NRSN1Q8IZ57 195 aa6.24□□□□□ -1.41
CCDC39-202ENST00000471307 PAQR4Q8N4S7 273 aaPredicted RBP6.24□□□□□ -1.41
CCDC39-202ENST00000471307 PARD3BQ8TEW8 1205 aa6.24□□□□□ -1.41
CCDC39-202ENST00000471307 MSI2Q96DH6 328 aaKnown RBP6.24□□□□□ -1.41
CCDC39-202ENST00000471307 SGCZQ96LD1 299 aa6.24□□□□□ -1.41
CCDC39-202ENST00000471307 SFXN1Q9H9B4 322 aa6.24□□□□□ -1.41
CCDC39-202ENST00000471307 SLC39A10Q9ULF5 831 aa6.24□□□□□ -1.41
CCDC39-202ENST00000471307 COG5Q9UP83 839 aa6.24□□□□□ -1.41
CCDC39-202ENST00000471307 ANKRD50Q9ULJ7 1429 aa6.24□□□□□ -1.41
CCDC39-202ENST00000471307 PLXNC1O60486 1568 aa6.23□□□□□ -1.41
CCDC39-202ENST00000471307 KDM5CP41229 1560 aa6.23□□□□□ -1.41
CCDC39-202ENST00000471307 MAGI2Q86UL8 1455 aa6.23□□□□□ -1.41
CCDC39-202ENST00000471307 ATG13O75143 517 aa6.23□□□□□ -1.41
CCDC39-202ENST00000471307 ALDOAP04075 364 aaKnown RBP6.23□□□□□ -1.41
CCDC39-202ENST00000471307 ALPLP05186 524 aa6.23□□□□□ -1.41
CCDC39-202ENST00000471307 SMTNL2Q2TAL5 461 aa6.23□□□□□ -1.41
CCDC39-202ENST00000471307 PIK3CD-AS1Q5SR53 167 aa6.23□□□□□ -1.41
CCDC39-202ENST00000471307 DDIASQ8IXT1 998 aa6.23□□□□□ -1.41
CCDC39-202ENST00000471307 CENPIQ92674 756 aaPredicted RBP6.23□□□□□ -1.41
CCDC39-202ENST00000471307 SLC8A2Q9UPR5 921 aa6.23□□□□□ -1.41
CCDC39-202ENST00000471307 PCDHGB2Q9Y5G2 931 aa6.23□□□□□ -1.41
CCDC39-202ENST00000471307 ATP7AQ04656 1500 aa6.23□□□□□ -1.41
CCDC39-202ENST00000471307 DUOX2Q9NRD8 1548 aa6.23□□□□□ -1.41
CCDC39-202ENST00000471307 GCC2Q8IWJ2 1684 aa6.23□□□□□ -1.41
CCDC39-202ENST00000471307 RICTORQ6R327 1708 aa6.22□□□□□ -1.41
CCDC39-202ENST00000471307 DHX29Q7Z478 1369 aaKnown RBP6.22□□□□□ -1.41
CCDC39-202ENST00000471307 KIDINS220Q9ULH0 1771 aa6.22□□□□□ -1.41
CCDC39-202ENST00000471307 IGKV2D-30A0A075B6S6 120 aa6.22□□□□□ -1.41
CCDC39-202ENST00000471307 TMEM272A0A1B0GTI8 110 aa6.22□□□□□ -1.41
CCDC39-202ENST00000471307 SPTLC2O15270 562 aa6.22□□□□□ -1.41
CCDC39-202ENST00000471307 CCKBRP32239 447 aa6.22□□□□□ -1.41
CCDC39-202ENST00000471307 GRM4Q14833 912 aa6.22□□□□□ -1.41
CCDC39-202ENST00000471307 PRTGQ2VWP7 1150 aa6.22□□□□□ -1.41
CCDC39-202ENST00000471307 KIAA1755Q5JYT7 1200 aa6.22□□□□□ -1.41
CCDC39-202ENST00000471307 CRELD2Q6UXH1 353 aaPredicted RBP6.22□□□□□ -1.41
CCDC39-202ENST00000471307 RSC1A1Q92681 617 aa6.22□□□□□ -1.41
CCDC39-202ENST00000471307 KIAA1191Q96A73 305 aa6.22□□□□□ -1.41
CCDC39-202ENST00000471307 ZNF347Q96SE7 839 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms