RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 DEPDC7Q96QD5 511 aa19.67■□□□□ 0.74
NCKIPSD-209ENST00000470006 ABCC13Q9NSE7 274 aa19.67■□□□□ 0.74
NCKIPSD-209ENST00000470006 ERVW-1Q9UQF0 538 aa19.67■□□□□ 0.74
NCKIPSD-209ENST00000470006 TDRD6O60522 2096 aaKnown RBP19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 TULP2O00295 520 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 TRIM38O00635 465 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 PDXKO00764 312 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 CUTAO60888 179 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 PPP6R2O75170 966 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 MOCS3O95396 460 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 KRT10P13645 584 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 KRT13P13646 458 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 PDIA4P13667 645 aaKnown RBP19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 C5AR1P21730 350 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 VAC14Q08AM6 782 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 CDH18Q13634 790 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 GOLGA7BQ2TAP0 167 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 SHC4Q6S5L8 630 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 UNC45BQ8IWX7 931 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 GRAMD1CQ8IYS0 662 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 TTC39CQ8N584 583 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 HJURPQ8NCD3 748 aaPredicted RBP19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 FIBINQ8TAL6 211 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 HIC2Q96JB3 615 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 MRGPRX3Q96LB0 322 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 ABCG4Q9H172 646 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 OSBPL2Q9H1P3 480 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 CISHQ9NSE2 258 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 HESX1Q9UBX0 185 aa19.66■□□□□ 0.74
NCKIPSD-209ENST00000470006 YJEFN3A6XGL0 299 aa19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 E7ENQ6 273 aa19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 FFAR2O15552 330 aa19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 IRAK2O43187 625 aa19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 CALUO43852 315 aaPredicted RBP19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 ACSL4O60488 711 aa19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 SLC6A4P31645 630 aa19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 CTSOP43234 321 aaPredicted RBP19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 RAD23BP54727 409 aa19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 PPP3CAQ08209 521 aa19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 ARHGAP17Q68EM7 881 aa19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 MMS22LQ6ZRQ5 1243 aa19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 CEP57L1Q8IYX8 460 aa19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 KIAA0895Q8NCT3 520 aa19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 TATDN2Q93075 761 aa19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 MED8Q96G25 268 aa19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 ZNF396Q96N95 335 aaPredicted RBP19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 FAM129BQ96TA1 746 aa19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 DDX50Q9BQ39 737 aaKnown RBP19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 DPH1Q9BZG8 443 aa19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 KCTD10Q9H3F6 313 aa19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 THSD1Q9NS62 852 aa19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 WDR70Q9NW82 654 aa19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 FAM13BQ9NYF5 915 aa19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 INTS6Q9UL03 887 aaKnown RBP19.65■□□□□ 0.74
NCKIPSD-209ENST00000470006 XPO1O14980 1071 aaKnown RBP19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 CSO75390 466 aaKnown RBP19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 SRPRAP08240 638 aaKnown RBP19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 LCP1P13796 627 aa19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 ERVPABLB-1P60509 514 aa19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 ECT2LQ008S8 904 aa19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 CUL4AQ13619 759 aa19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 POM121L1PQ3SYA9 428 aa19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 PITRM1Q5JRX3 1037 aa19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 NUGGCQ68CJ6 796 aa19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 INTS8Q75QN2 995 aaKnown RBP19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 BHLHA9Q7RTU4 235 aa19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 IQCHQ86VS3 1027 aa19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 KDM1BQ8NB78 822 aa19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 TTC9Q92623 222 aa19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 KLHDC7BQ96G42 594 aa19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 VCPIP1Q96JH7 1222 aa19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 RPL10LQ96L21 214 aaKnown RBP19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 POLR1BQ9H9Y6 1135 aa19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 SLCO3A1Q9UIG8 710 aa19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 MTMR6Q9Y217 621 aa19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 DOCK9Q9BZ29 2069 aa19.64■□□□□ 0.73
NCKIPSD-209ENST00000470006 LATO43561 262 aa19.63■□□□□ 0.73
NCKIPSD-209ENST00000470006 OPA1O60313 960 aa19.63■□□□□ 0.73
NCKIPSD-209ENST00000470006 NNMTP40261 264 aa19.63■□□□□ 0.73
NCKIPSD-209ENST00000470006 LSSP48449 732 aa19.63■□□□□ 0.73
NCKIPSD-209ENST00000470006 TBX4P57082 545 aa19.63■□□□□ 0.73
NCKIPSD-209ENST00000470006 RPS24P62847 133 aaKnown RBP19.63■□□□□ 0.73
NCKIPSD-209ENST00000470006 OVGP1Q12889 678 aa19.63■□□□□ 0.73
NCKIPSD-209ENST00000470006 ARID5BQ14865 1188 aa19.63■□□□□ 0.73
NCKIPSD-209ENST00000470006 FAM133BQ5BKY9 247 aaKnown RBP19.63■□□□□ 0.73
NCKIPSD-209ENST00000470006 KIAA1614Q5VZ46 1190 aa19.63■□□□□ 0.73
NCKIPSD-209ENST00000470006 SLC25A45Q8N413 288 aa19.63■□□□□ 0.73
NCKIPSD-209ENST00000470006 UBA3Q8TBC4 463 aa19.63■□□□□ 0.73
NCKIPSD-209ENST00000470006 TMEM174Q8WUU8 243 aa19.63■□□□□ 0.73
NCKIPSD-209ENST00000470006 LMLNQ96KR4 655 aa19.63■□□□□ 0.73
NCKIPSD-209ENST00000470006 IRX2Q9BZI1 471 aaPredicted RBP19.63■□□□□ 0.73
NCKIPSD-209ENST00000470006 CYTH4Q9UIA0 394 aa19.63■□□□□ 0.73
NCKIPSD-209ENST00000470006 TSPAN16Q9UKR8 245 aa19.63■□□□□ 0.73
NCKIPSD-209ENST00000470006 HEMK1Q9Y5R4 338 aaPredicted RBP19.63■□□□□ 0.73
NCKIPSD-209ENST00000470006 RTN2O75298 545 aa19.62■□□□□ 0.73
NCKIPSD-209ENST00000470006 CD19P15391 556 aa19.62■□□□□ 0.73
NCKIPSD-209ENST00000470006 MZF1P28698 734 aaPredicted RBP19.62■□□□□ 0.73
NCKIPSD-209ENST00000470006 RBMS1P29558 406 aaKnown RBP19.62■□□□□ 0.73
NCKIPSD-209ENST00000470006 NUMBP49757 651 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms