RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 LRRN4CLQ8ND94 238 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 ACTL9Q8TC94 416 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 SH3RF2Q8TEC5 729 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 SEC14L1Q92503 715 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 RNF34Q969K3 372 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 IGSF8Q969P0 613 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 TBC1D31Q96DN5 1066 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 MYEOVQ96EZ4 313 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 PRICKLE1Q96MT3 831 aaPredicted RBP8.4□□□□□ -1.06
NPHP3-204ENST00000469232 RUNDC3BQ96NL0 473 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 ASB16Q96NS5 453 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 NECTIN4Q96NY8 510 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 TSGA13Q96PP4 275 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 DDX50Q9BQ39 737 aaKnown RBP8.4□□□□□ -1.06
NPHP3-204ENST00000469232 HEMGNQ9BXL5 484 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 BRD8Q9H0E9 1235 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 IGFLR1Q9H665 355 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 NOL6Q9H6R4 1146 aaKnown RBP8.4□□□□□ -1.06
NPHP3-204ENST00000469232 DTLQ9NZJ0 730 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 MARK1Q9P0L2 795 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 COX16Q9P0S2 106 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 CDH7Q9ULB5 785 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 CXorf51AA0A1B0GTR3 108 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 HACD1B0YJ81 288 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 APOL1O14791 398 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 PECAM1P16284 738 aaPredicted RBP8.4□□□□□ -1.07
NPHP3-204ENST00000469232 COILP38432 576 aaPredicted RBP8.4□□□□□ -1.07
NPHP3-204ENST00000469232 PTGIRP43119 386 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 GCGRP47871 477 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 MAPKAPK2P49137 400 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 NDST2P52849 883 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 VCPP55072 806 aaKnown RBP8.4□□□□□ -1.07
NPHP3-204ENST00000469232 GALNT2Q10471 571 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 ATAT1Q5SQI0 421 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 TTC27Q6P3X3 843 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 CCDC50Q8IVM0 306 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 CELF5Q8N6W0 485 aaKnown RBP8.4□□□□□ -1.07
NPHP3-204ENST00000469232 NPWQ8N729 165 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 NOA1Q8NC60 698 aaKnown RBP8.4□□□□□ -1.07
NPHP3-204ENST00000469232 ZSCAN18Q8TBC5 510 aaPredicted RBP8.4□□□□□ -1.07
NPHP3-204ENST00000469232 FGF13Q92913 245 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 SMARCD2Q92925 531 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 RSPRY1Q96DX4 576 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 P2RY11Q96G91 374 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 LMLNQ96KR4 655 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 RIPOR3Q96MK2 946 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 LRRC3BQ96PB8 259 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 ZYG11BQ9C0D3 744 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 NACA2Q9H009 215 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 CATSPERBQ9H7T0 1116 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 PIDD1Q9HB75 910 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 USP29Q9HBJ7 922 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 TRPC7Q9HCX4 862 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 SMPD4Q9NXE4 827 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 CFAP97Q9P2B7 532 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 CCL26Q9Y258 94 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 TBC1D30Q9Y2I9 924 aa8.4□□□□□ -1.07
NPHP3-204ENST00000469232 BRWD1Q9NSI6 2320 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 GOLGA6L10A0A0M3HER8 536 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 GOLGA6L7A0A1B0GV03 622 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 BCLAF3A2AJT9 711 aaKnown RBP8.39□□□□□ -1.07
NPHP3-204ENST00000469232 NCAM2O15394 837 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 PENKP01210 267 aaPredicted RBP8.39□□□□□ -1.07
NPHP3-204ENST00000469232 EPHB2P29323 1055 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 CHKAP35790 457 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 AVPR1AP37288 418 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 IRAK1P51617 712 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 DRG2P55039 364 aaKnown RBP8.39□□□□□ -1.07
NPHP3-204ENST00000469232 CDH4P55283 916 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 YBEYP58557 167 aaPredicted RBP8.39□□□□□ -1.07
NPHP3-204ENST00000469232 OTUD4Q01804 1114 aaKnown RBP8.39□□□□□ -1.07
NPHP3-204ENST00000469232 GBE1Q04446 702 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 TNK2Q07912 1038 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 FCHO2Q0JRZ9 810 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 CBLBQ13191 982 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 DHX34Q14147 1143 aaKnown RBP8.39□□□□□ -1.07
NPHP3-204ENST00000469232 PRKD1Q15139 912 aaPredicted RBP8.39□□□□□ -1.07
NPHP3-204ENST00000469232 ALFQ53S48 1182 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 ODF2Q5BJF6 829 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 FAM78AQ5JUQ0 283 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 RAP1GAP2Q684P5 730 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 CES5AQ6NT32 575 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 LRRC31Q6UY01 552 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 ZNF783Q6ZMS7 281 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 SYDE1Q6ZW31 735 aaPredicted RBP8.39□□□□□ -1.07
NPHP3-204ENST00000469232 BZW1Q7L1Q6 419 aaKnown RBP8.39□□□□□ -1.07
NPHP3-204ENST00000469232 CHSY1Q86X52 802 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 RFX6Q8HWS3 928 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 DENND1CQ8IV53 801 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 KLHDC8BQ8IXV7 354 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 MYRIPQ8NFW9 859 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 ATL2Q8NHH9 583 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 RUBCNQ92622 972 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 E2F7Q96AV8 911 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 HDAC11Q96DB2 347 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 GUCD1Q96NT3 240 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 GAS2L1Q99501 681 aaPredicted RBP8.39□□□□□ -1.07
NPHP3-204ENST00000469232 CDX2Q99626 313 aaPredicted RBP8.39□□□□□ -1.07
NPHP3-204ENST00000469232 TMUB1Q9BVT8 246 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 AP1M1Q9BXS5 423 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms