RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 CXorf38Q8TB03 319 aa11.04□□□□□ -0.64
TRAIP-202ENST00000469027 WFIKKN2Q8TEU8 576 aa11.04□□□□□ -0.64
TRAIP-202ENST00000469027 NANOS1Q8WY41 292 aaKnown RBP11.04□□□□□ -0.64
TRAIP-202ENST00000469027 MARVELD3Q96A59 401 aa11.04□□□□□ -0.64
TRAIP-202ENST00000469027 FOXP3Q9BZS1 431 aa11.04□□□□□ -0.64
TRAIP-202ENST00000469027 PARVGQ9HBI0 331 aa11.04□□□□□ -0.64
TRAIP-202ENST00000469027 PREBQ9HCU5 417 aa11.04□□□□□ -0.64
TRAIP-202ENST00000469027 DNAJC28Q9NX36 388 aa11.04□□□□□ -0.64
TRAIP-202ENST00000469027 DMTF1Q9Y222 760 aa11.04□□□□□ -0.64
TRAIP-202ENST00000469027 CCDC168Q8NDH2 2452 aa11.04□□□□□ -0.64
TRAIP-202ENST00000469027 APCP25054 2843 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 ARHGAP10A1A4S6 786 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 EME2A4GXA9 379 aaPredicted RBP11.03□□□□□ -0.64
TRAIP-202ENST00000469027 VWA3AA6NCI4 1184 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 EFCAB7A8K855 629 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 SIN3BO75182 1162 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 CNTN5O94779 1100 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 DLDP09622 509 aaKnown RBP11.03□□□□□ -0.64
TRAIP-202ENST00000469027 PRF1P14222 555 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 CORO1AP31146 461 aaKnown RBP11.03□□□□□ -0.64
TRAIP-202ENST00000469027 SLC6A4P31645 630 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 ATP1A2P50993 1020 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 MAPK10P53779 464 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 ST8SIA6P61647 398 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 HMGN5P82970 282 aaKnown RBP11.03□□□□□ -0.64
TRAIP-202ENST00000469027 POU5F1Q01860 360 aaKnown RBP11.03□□□□□ -0.64
TRAIP-202ENST00000469027 CUL4AQ13619 759 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 NOC3LQ8WTT2 800 aaKnown RBP11.03□□□□□ -0.64
TRAIP-202ENST00000469027 POMGNT1Q8WZA1 660 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 HPDLQ96IR7 371 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 CATSPER2Q96P56 530 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 B3GNT5Q9BYG0 378 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 MTMR12Q9C0I1 747 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 DPEP3Q9H4B8 488 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 DMAP1Q9NPF5 467 aaPredicted RBP11.03□□□□□ -0.64
TRAIP-202ENST00000469027 BLOC1S4Q9NUP1 217 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 ABCB8Q9NUT2 735 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 FOXJ2Q9P0K8 574 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 LIMCH1Q9UPQ0 1083 aa11.03□□□□□ -0.64
TRAIP-202ENST00000469027 PRAMEF26H0Y7S4 382 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 FAM13AO94988 1023 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 KLKB1P03952 638 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 GOT1P17174 413 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 POLR2EP19388 210 aaKnown RBP11.02□□□□□ -0.65
TRAIP-202ENST00000469027 ITIH1P19827 911 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 NR1D1P20393 614 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 HLA-FP30511 346 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 NUDT1P36639 197 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 HNRNPKP61978 463 aaKnown RBP eCLIP11.02□□□□□ -0.65
TRAIP-202ENST00000469027 SEPT6Q14141 434 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 FGL2Q14314 439 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 DEFB133Q30KQ1 61 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 SETMARQ53H47 684 aaPredicted RBP11.02□□□□□ -0.65
TRAIP-202ENST00000469027 MBLAC2Q68D91 279 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.02□□□□□ -0.65
TRAIP-202ENST00000469027 DENND1CQ8IV53 801 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 AHI1Q8N157 1196 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 ZSWIM2Q8NEG5 633 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 CPT1CQ8TCG5 803 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 CDK5RAP3Q96JB5 506 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 TMX3Q96JJ7 454 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 PPP1R13BQ96KQ4 1090 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 CCDC3Q9BQI4 270 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 MRPL45Q9BRJ2 306 aaKnown RBP11.02□□□□□ -0.65
TRAIP-202ENST00000469027 FAM213AQ9BRX8 229 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 DCLK3Q9C098 648 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 ZHX3Q9H4I2 956 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 FBXO44Q9H4M3 255 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 PRDM8Q9NQV8 689 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 FOXD4L1Q9NU39 408 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 CYTH4Q9UIA0 394 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 SIX4Q9UIU6 781 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 GGA2Q9UJY4 613 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 TP53TG5Q9Y2B4 290 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 LOXL2Q9Y4K0 774 aa11.02□□□□□ -0.65
TRAIP-202ENST00000469027 A0A1W2PQ27 194 aa11.01□□□□□ -0.65
TRAIP-202ENST00000469027 A0A1W2PQ64 194 aa11.01□□□□□ -0.65
TRAIP-202ENST00000469027 A0A1W2PQC6 194 aa11.01□□□□□ -0.65
TRAIP-202ENST00000469027 TMX2-CTNND1H3BSU7 103 aa11.01□□□□□ -0.65
TRAIP-202ENST00000469027 HNRNPRO43390 633 aaKnown RBP11.01□□□□□ -0.65
TRAIP-202ENST00000469027 PRKAR1AP10644 381 aa11.01□□□□□ -0.65
TRAIP-202ENST00000469027 PABPC1P11940 636 aaKnown RBP11.01□□□□□ -0.65
TRAIP-202ENST00000469027 RPIAP49247 311 aa11.01□□□□□ -0.65
TRAIP-202ENST00000469027 DHX8Q14562 1220 aaKnown RBP11.01□□□□□ -0.65
TRAIP-202ENST00000469027 MCM6Q14566 821 aa11.01□□□□□ -0.65
TRAIP-202ENST00000469027 EIF2S3LQ2VIR3 472 aaKnown RBP11.01□□□□□ -0.65
TRAIP-202ENST00000469027 FAM35AQ86V20 835 aa11.01□□□□□ -0.65
TRAIP-202ENST00000469027 DTX1Q86Y01 620 aa11.01□□□□□ -0.65
TRAIP-202ENST00000469027 SLC34A3Q8N130 599 aa11.01□□□□□ -0.65
TRAIP-202ENST00000469027 AADATQ8N5Z0 425 aa11.01□□□□□ -0.65
TRAIP-202ENST00000469027 IL22RA1Q8N6P7 574 aa11.01□□□□□ -0.65
TRAIP-202ENST00000469027 FAM184AQ8NB25 1140 aa11.01□□□□□ -0.65
TRAIP-202ENST00000469027 B3GALNT2Q8NCR0 500 aa11.01□□□□□ -0.65
TRAIP-202ENST00000469027 ZNF548Q8NEK5 533 aaPredicted RBP11.01□□□□□ -0.65
TRAIP-202ENST00000469027 PRR7Q8TB68 274 aa11.01□□□□□ -0.65
TRAIP-202ENST00000469027 USP7Q93009 1102 aa11.01□□□□□ -0.65
TRAIP-202ENST00000469027 NAT6Q93015 286 aa11.01□□□□□ -0.65
TRAIP-202ENST00000469027 ANKRD36BP1Q96IX9 119 aa11.01□□□□□ -0.65
TRAIP-202ENST00000469027 GFM1Q96RP9 751 aaKnown RBP11.01□□□□□ -0.65
TRAIP-202ENST00000469027 IL12RB2Q99665 862 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms