RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 ITIH6Q6UXX5 1313 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 SLC16A3O15427 465 aaKnown RBP13.55□□□□□ -0.24
PTPN7-207ENST00000468385 YKT6O15498 198 aa13.55□□□□□ -0.24
PTPN7-207ENST00000468385 PRB1P04280 392 aa13.55□□□□□ -0.24
PTPN7-207ENST00000468385 FYNP06241 537 aa13.55□□□□□ -0.24
PTPN7-207ENST00000468385 SRPRAP08240 638 aaKnown RBP13.55□□□□□ -0.24
PTPN7-207ENST00000468385 CDK4P11802 303 aa13.55□□□□□ -0.24
PTPN7-207ENST00000468385 SLC8A1P32418 973 aa13.55□□□□□ -0.24
PTPN7-207ENST00000468385 HNF1BP35680 557 aa13.55□□□□□ -0.24
PTPN7-207ENST00000468385 EIF2S3P41091 472 aaKnown RBP13.55□□□□□ -0.24
PTPN7-207ENST00000468385 CCR5P51681 352 aa13.55□□□□□ -0.24
PTPN7-207ENST00000468385 ADPRHP54922 357 aa13.55□□□□□ -0.24
PTPN7-207ENST00000468385 LRMPQ12912 555 aa13.55□□□□□ -0.24
PTPN7-207ENST00000468385 TARDBPQ13148 414 aaKnown RBP eCLIP13.55□□□□□ -0.24
PTPN7-207ENST00000468385 MS4A13Q5J8X5 152 aa13.55□□□□□ -0.24
PTPN7-207ENST00000468385 PITRM1Q5JRX3 1037 aa13.55□□□□□ -0.24
PTPN7-207ENST00000468385 FBXL19Q6PCT2 694 aa13.55□□□□□ -0.24
PTPN7-207ENST00000468385 AADATQ8N5Z0 425 aa13.55□□□□□ -0.24
PTPN7-207ENST00000468385 EID2Q8N6I1 236 aa13.55□□□□□ -0.24
PTPN7-207ENST00000468385 TSC1Q92574 1164 aa13.55□□□□□ -0.24
PTPN7-207ENST00000468385 SLC39A13Q96H72 371 aa13.55□□□□□ -0.24
PTPN7-207ENST00000468385 DDX50Q9BQ39 737 aaKnown RBP13.55□□□□□ -0.24
PTPN7-207ENST00000468385 NUCKS1Q9H1E3 243 aaKnown RBP13.55□□□□□ -0.24
PTPN7-207ENST00000468385 PRORYQ9H606 182 aa13.55□□□□□ -0.24
PTPN7-207ENST00000468385 GDF3Q9NR23 364 aa13.55□□□□□ -0.24
PTPN7-207ENST00000468385 SLCO3A1Q9UIG8 710 aa13.55□□□□□ -0.24
PTPN7-207ENST00000468385 ASXL3Q9C0F0 2248 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 EDDM13A0A1B0GTR0 161 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 TYW5A2RUC4 315 aaKnown RBP13.54□□□□□ -0.24
PTPN7-207ENST00000468385 M0QYV0 167 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 RNF225M0QZC1 329 aaPredicted RBP13.54□□□□□ -0.24
PTPN7-207ENST00000468385 ZNF202O95125 648 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 LUC7L3O95232 432 aaKnown RBP13.54□□□□□ -0.24
PTPN7-207ENST00000468385 ZIC2O95409 532 aaPredicted RBP13.54□□□□□ -0.24
PTPN7-207ENST00000468385 PAEPP09466 180 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 GOT1P17174 413 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 TBXAS1P24557 533 aaPredicted RBP13.54□□□□□ -0.24
PTPN7-207ENST00000468385 PRCPP42785 496 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 PSMD8P48556 350 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 NXPH1P58417 271 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 KRT85P78386 507 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 BNIP3Q12983 259 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 CDH18Q13634 790 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 CNGA2Q16280 664 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 DCAF6Q58WW2 860 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 HES3Q5TGS1 186 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 TMEM270Q6UE05 265 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 SND1Q7KZF4 910 aaKnown RBP eCLIP13.54□□□□□ -0.24
PTPN7-207ENST00000468385 CFAP52Q8N1V2 620 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 STK40Q8N2I9 435 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 DQX1Q8TE96 717 aaKnown RBP13.54□□□□□ -0.24
PTPN7-207ENST00000468385 PTPRN2Q92932 1015 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 SLC35C1Q96A29 364 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 HSFY1Q96LI6 401 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 XPO7Q9UIA9 1087 aaKnown RBP13.54□□□□□ -0.24
PTPN7-207ENST00000468385 TLR6Q9Y2C9 796 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 ZDHHC9Q9Y397 364 aa13.54□□□□□ -0.24
PTPN7-207ENST00000468385 GCN1Q92616 2671 aaKnown RBP13.53□□□□□ -0.24
PTPN7-207ENST00000468385 A0A1W2PQ27 194 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 A0A1W2PQ64 194 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 TLR4O00206 839 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 C1QL1O75973 258 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 CALCAP01258 141 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 C5AR1P21730 350 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 BRD2P25440 801 aaKnown RBP13.53□□□□□ -0.24
PTPN7-207ENST00000468385 RXRGP48443 463 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 PMS1P54277 932 aaKnown RBP13.53□□□□□ -0.24
PTPN7-207ENST00000468385 PPP2CBP62714 309 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 PPP2CAP67775 309 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 ECT2LQ008S8 904 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 SEMG2Q02383 582 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 NNTQ13423 1086 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 RTP5Q14D33 572 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 SFMBT2Q5VUG0 894 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 KANSL1Q7Z3B3 1105 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 APCDD1Q8J025 514 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 OR14C36Q8NHC7 312 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 KAT5Q92993 513 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 FAM131CQ96AQ9 280 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 SERAC1Q96JX3 654 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 SERPINB11Q96P15 392 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 NRSN2Q9GZP1 204 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 MIS12Q9H081 205 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 ERVMER34-1Q9H9K5 563 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 NAALADL1Q9UQQ1 740 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 PCDHB4Q9Y5E5 795 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 RAI2Q9Y5P3 530 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 AK5Q9Y6K8 562 aa13.53□□□□□ -0.24
PTPN7-207ENST00000468385 KNTC1P50748 2209 aa13.52□□□□□ -0.24
PTPN7-207ENST00000468385 TK2O00142 265 aa13.52□□□□□ -0.25
PTPN7-207ENST00000468385 ATXN7O15265 892 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-207ENST00000468385 LATO43561 262 aa13.52□□□□□ -0.25
PTPN7-207ENST00000468385 FBXO21O94952 628 aa13.52□□□□□ -0.25
PTPN7-207ENST00000468385 MOCS3O95396 460 aa13.52□□□□□ -0.25
PTPN7-207ENST00000468385 MOCS2O96007 188 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-207ENST00000468385 ADH1BP00325 375 aa13.52□□□□□ -0.25
PTPN7-207ENST00000468385 MZF1P28698 734 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-207ENST00000468385 DRD3P35462 400 aa13.52□□□□□ -0.25
PTPN7-207ENST00000468385 RPL34P49207 117 aaKnown RBP13.52□□□□□ -0.25
PTPN7-207ENST00000468385 ARRB1P49407 418 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms