RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 F9P00740 461 aa19.7■□□□□ 0.74
COL7A1-207ENST00000467985 CEACAM1P13688 526 aa19.7■□□□□ 0.74
COL7A1-207ENST00000467985 RPS14P62263 151 aaKnown RBP19.7■□□□□ 0.74
COL7A1-207ENST00000467985 PLEKHG6Q3KR16 790 aa19.7■□□□□ 0.74
COL7A1-207ENST00000467985 N4BP2L1Q5TBK1 243 aaPredicted RBP19.7■□□□□ 0.74
COL7A1-207ENST00000467985 SH3PXD2AQ5TCZ1 1133 aa19.7■□□□□ 0.74
COL7A1-207ENST00000467985 SND1Q7KZF4 910 aaKnown RBP eCLIP19.7■□□□□ 0.74
COL7A1-207ENST00000467985 ERICH1Q86X53 443 aa19.7■□□□□ 0.74
COL7A1-207ENST00000467985 ZNF677Q86XU0 584 aa19.7■□□□□ 0.74
COL7A1-207ENST00000467985 HDDC3Q8N4P3 179 aa19.7■□□□□ 0.74
COL7A1-207ENST00000467985 MYO19Q96H55 970 aa19.7■□□□□ 0.74
COL7A1-207ENST00000467985 MRGPRX3Q96LB0 322 aa19.7■□□□□ 0.74
COL7A1-207ENST00000467985 GTPBP2Q9BX10 602 aaKnown RBP19.7■□□□□ 0.74
COL7A1-207ENST00000467985 ZDHHC5Q9C0B5 715 aa19.7■□□□□ 0.74
COL7A1-207ENST00000467985 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.7■□□□□ 0.74
COL7A1-207ENST00000467985 A0A1B0GTW7 788 aa19.69■□□□□ 0.74
COL7A1-207ENST00000467985 TARSL2A2RTX5 802 aaKnown RBP19.69■□□□□ 0.74
COL7A1-207ENST00000467985 UPK3BL1B0FP48 263 aa19.69■□□□□ 0.74
COL7A1-207ENST00000467985 UPK3BL2E5RIL1 263 aa19.69■□□□□ 0.74
COL7A1-207ENST00000467985 SULT2A1Q06520 285 aa19.69■□□□□ 0.74
COL7A1-207ENST00000467985 STX1AQ16623 288 aa19.69■□□□□ 0.74
COL7A1-207ENST00000467985 BRMS1LQ5PSV4 323 aa19.69■□□□□ 0.74
COL7A1-207ENST00000467985 ACBD5Q5T8D3 534 aaPredicted RBP19.69■□□□□ 0.74
COL7A1-207ENST00000467985 DCAF12L1Q5VU92 463 aa19.69■□□□□ 0.74
COL7A1-207ENST00000467985 FBXL22Q6P050 247 aa19.69■□□□□ 0.74
COL7A1-207ENST00000467985 MMS22LQ6ZRQ5 1243 aa19.69■□□□□ 0.74
COL7A1-207ENST00000467985 FAM124AQ86V42 546 aa19.69■□□□□ 0.74
COL7A1-207ENST00000467985 CCAR2Q8N163 923 aaKnown RBP19.69■□□□□ 0.74
COL7A1-207ENST00000467985 PGAP3Q96FM1 320 aaPredicted RBP19.69■□□□□ 0.74
COL7A1-207ENST00000467985 RPRD1AQ96P16 312 aaPredicted RBP19.69■□□□□ 0.74
COL7A1-207ENST00000467985 NPY6RQ99463 290 aa19.69■□□□□ 0.74
COL7A1-207ENST00000467985 RSPH9Q9H1X1 276 aaPredicted RBP19.69■□□□□ 0.74
COL7A1-207ENST00000467985 GANQ9H2C0 597 aa19.69■□□□□ 0.74
COL7A1-207ENST00000467985 SLC32A1Q9H598 525 aa19.69■□□□□ 0.74
COL7A1-207ENST00000467985 FANCLQ9NW38 375 aa19.69■□□□□ 0.74
COL7A1-207ENST00000467985 NCKAP1Q9Y2A7 1128 aa19.69■□□□□ 0.74
COL7A1-207ENST00000467985 ASCC3Q8N3C0 2202 aaKnown RBP19.69■□□□□ 0.74
COL7A1-207ENST00000467985 PCDH15Q96QU1 1955 aa19.68■□□□□ 0.74
COL7A1-207ENST00000467985 EDDM13A0A1B0GTR0 161 aa19.68■□□□□ 0.74
COL7A1-207ENST00000467985 OPHN1O60890 802 aa19.68■□□□□ 0.74
COL7A1-207ENST00000467985 NNMTP40261 264 aa19.68■□□□□ 0.74
COL7A1-207ENST00000467985 CXCR3P49682 368 aa19.68■□□□□ 0.74
COL7A1-207ENST00000467985 PLK1P53350 603 aa19.68■□□□□ 0.74
COL7A1-207ENST00000467985 RNASE9P60153 205 aaKnown RBP19.68■□□□□ 0.74
COL7A1-207ENST00000467985 MYL5Q02045 173 aa19.68■□□□□ 0.74
COL7A1-207ENST00000467985 AUHQ13825 339 aaKnown RBP19.68■□□□□ 0.74
COL7A1-207ENST00000467985 FAM102AQ5T9C2 384 aaPredicted RBP19.68■□□□□ 0.74
COL7A1-207ENST00000467985 TAF3Q5VWG9 929 aa19.68■□□□□ 0.74
COL7A1-207ENST00000467985 USP30Q70CQ3 517 aa19.68■□□□□ 0.74
COL7A1-207ENST00000467985 NOP9Q86U38 636 aaKnown RBP19.68■□□□□ 0.74
COL7A1-207ENST00000467985 XYLT1Q86Y38 959 aa19.68■□□□□ 0.74
COL7A1-207ENST00000467985 EPS8L1Q8TE68 723 aa19.68■□□□□ 0.74
COL7A1-207ENST00000467985 NT5C3BQ969T7 300 aa19.68■□□□□ 0.74
COL7A1-207ENST00000467985 BTBD1Q9H0C5 482 aa19.68■□□□□ 0.74
COL7A1-207ENST00000467985 SGK2Q9HBY8 427 aa19.68■□□□□ 0.74
COL7A1-207ENST00000467985 ITIH6Q6UXX5 1313 aa19.68■□□□□ 0.74
COL7A1-207ENST00000467985 SIN3BO75182 1162 aa19.67■□□□□ 0.74
COL7A1-207ENST00000467985 PAGE1O75459 146 aa19.67■□□□□ 0.74
COL7A1-207ENST00000467985 CLDN11O75508 207 aa19.67■□□□□ 0.74
COL7A1-207ENST00000467985 MAOBP27338 520 aa19.67■□□□□ 0.74
COL7A1-207ENST00000467985 SLC14A1Q13336 389 aa19.67■□□□□ 0.74
COL7A1-207ENST00000467985 SLC25A52Q3SY17 297 aa19.67■□□□□ 0.74
COL7A1-207ENST00000467985 ARCQ7LC44 396 aa19.67■□□□□ 0.74
COL7A1-207ENST00000467985 APCDD1Q8J025 514 aa19.67■□□□□ 0.74
COL7A1-207ENST00000467985 MINDY1Q8N5J2 469 aa19.67■□□□□ 0.74
COL7A1-207ENST00000467985 MIR1-1HGQ9H1L0 117 aa19.67■□□□□ 0.74
COL7A1-207ENST00000467985 WDCPQ9H6R7 721 aa19.67■□□□□ 0.74
COL7A1-207ENST00000467985 FAM207AQ9NSI2 230 aaPredicted RBP19.67■□□□□ 0.74
COL7A1-207ENST00000467985 PIGVQ9NUD9 493 aa19.67■□□□□ 0.74
COL7A1-207ENST00000467985 DNAAF2Q9NVR5 837 aaKnown RBP19.67■□□□□ 0.74
COL7A1-207ENST00000467985 ANGPTL2Q9UKU9 493 aa19.67■□□□□ 0.74
COL7A1-207ENST00000467985 VANGL2Q9ULK5 521 aa19.67■□□□□ 0.74
COL7A1-207ENST00000467985 HS3ST4Q9Y661 456 aa19.67■□□□□ 0.74
COL7A1-207ENST00000467985 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.66■□□□□ 0.74
COL7A1-207ENST00000467985 BCAT2O15382 392 aaPredicted RBP19.66■□□□□ 0.74
COL7A1-207ENST00000467985 SEMA4FO95754 770 aa19.66■□□□□ 0.74
COL7A1-207ENST00000467985 MMEP08473 750 aa19.66■□□□□ 0.74
COL7A1-207ENST00000467985 PDGFRAP16234 1089 aa19.66■□□□□ 0.74
COL7A1-207ENST00000467985 PMLP29590 882 aa19.66■□□□□ 0.74
COL7A1-207ENST00000467985 ACSL1P33121 698 aa19.66■□□□□ 0.74
COL7A1-207ENST00000467985 CTSOP43234 321 aaPredicted RBP19.66■□□□□ 0.74
COL7A1-207ENST00000467985 SULT1E1P49888 294 aa19.66■□□□□ 0.74
COL7A1-207ENST00000467985 POLR2FP61218 127 aaKnown RBP19.66■□□□□ 0.74
COL7A1-207ENST00000467985 NOMO3P69849 1222 aa19.66■□□□□ 0.74
COL7A1-207ENST00000467985 CDR2Q01850 454 aa19.66■□□□□ 0.74
COL7A1-207ENST00000467985 DEUP1Q05D60 604 aa19.66■□□□□ 0.74
COL7A1-207ENST00000467985 SEMA3BQ13214 749 aa19.66■□□□□ 0.74
COL7A1-207ENST00000467985 ZNF177Q13360 481 aaPredicted RBP19.66■□□□□ 0.74
COL7A1-207ENST00000467985 C5orf22Q49AR2 442 aa19.66■□□□□ 0.74
COL7A1-207ENST00000467985 C9orf64Q5T6V5 341 aa19.66■□□□□ 0.74
COL7A1-207ENST00000467985 CXorf57Q6NSI4 855 aaKnown RBP19.66■□□□□ 0.74
COL7A1-207ENST00000467985 LRSAM1Q6UWE0 723 aa19.66■□□□□ 0.74
COL7A1-207ENST00000467985 DHX40Q8IX18 779 aaKnown RBP19.66■□□□□ 0.74
COL7A1-207ENST00000467985 ZCCHC9Q8N567 271 aaKnown RBP19.66■□□□□ 0.74
COL7A1-207ENST00000467985 SPAG5Q96R06 1193 aa19.66■□□□□ 0.74
COL7A1-207ENST00000467985 TKTL2Q9H0I9 626 aa19.66■□□□□ 0.74
COL7A1-207ENST00000467985 PABPC3Q9H361 631 aaKnown RBP19.66■□□□□ 0.74
COL7A1-207ENST00000467985 FSCN3Q9NQT6 498 aa19.66■□□□□ 0.74
COL7A1-207ENST00000467985 ARHGEF38Q9NXL2 777 aa19.66■□□□□ 0.74
COL7A1-207ENST00000467985 TMEM63CQ9P1W3 806 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms