RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 PRICKLE1Q96MT3 831 aaPredicted RBP12.47□□□□□ -0.41
VPS16-206ENST00000466415 OLFM3Q96PB7 478 aa12.47□□□□□ -0.41
VPS16-206ENST00000466415 PNKPQ96T60 521 aa12.47□□□□□ -0.41
VPS16-206ENST00000466415 ERP44Q9BS26 406 aa12.47□□□□□ -0.41
VPS16-206ENST00000466415 PARD6BQ9BYG5 372 aa12.47□□□□□ -0.41
VPS16-206ENST00000466415 BRD8Q9H0E9 1235 aa12.47□□□□□ -0.41
VPS16-206ENST00000466415 TTYH1Q9H313 450 aaPredicted RBP12.47□□□□□ -0.41
VPS16-206ENST00000466415 RETREG1Q9H6L5 497 aa12.47□□□□□ -0.41
VPS16-206ENST00000466415 PCDH9Q9HC56 1237 aa12.47□□□□□ -0.41
VPS16-206ENST00000466415 FAM114A2Q9NRY5 505 aa12.47□□□□□ -0.41
VPS16-206ENST00000466415 MTCH2Q9Y6C9 303 aa12.47□□□□□ -0.41
VPS16-206ENST00000466415 ZFP37Q9Y6Q3 630 aaPredicted RBP12.47□□□□□ -0.41
VPS16-206ENST00000466415 A0A1B0GVM2 712 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 ESYT3A0FGR9 886 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 BCLAF3A2AJT9 711 aaKnown RBP12.46□□□□□ -0.41
VPS16-206ENST00000466415 TCAF2A6NFQ2 919 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 ARHGAP42A6NI28 874 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 TRDMT1O14717 391 aaKnown RBP12.46□□□□□ -0.41
VPS16-206ENST00000466415 NDC80O14777 642 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 RAMP2O60895 175 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 ERLIN1O75477 346 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 CLDN11O75508 207 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 CNTN5O94779 1100 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 CYBBP04839 570 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 RBL1P28749 1068 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 OR1E1P30953 314 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 STIP1P31948 543 aaKnown RBP12.46□□□□□ -0.41
VPS16-206ENST00000466415 CHKAP35790 457 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 IRAK1P51617 712 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 NDST2P52849 883 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 GALNT2Q10471 571 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 SLC10A2Q12908 348 aaPredicted RBP12.46□□□□□ -0.41
VPS16-206ENST00000466415 USP4Q13107 963 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 CALCOCO2Q13137 446 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 ADAM15Q13444 863 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 CUL1Q13616 776 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 HLTFQ14527 1009 aaKnown RBP eCLIP12.46□□□□□ -0.41
VPS16-206ENST00000466415 MAP9Q49MG5 647 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 ALFQ53S48 1182 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 ATAT1Q5SQI0 421 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 C6orf118Q5T5N4 469 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 SYCE2Q6PIF2 218 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 B4GALNT4Q76KP1 1039 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 CHST9Q7L1S5 443 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 NLRP14Q86W24 1093 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 CFAP52Q8N1V2 620 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 FAM71DQ8N9W8 422 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 TDRD5Q8NAT2 981 aaKnown RBP12.46□□□□□ -0.41
VPS16-206ENST00000466415 NETO2Q8NC67 525 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 ZSCAN18Q8TBC5 510 aaPredicted RBP12.46□□□□□ -0.41
VPS16-206ENST00000466415 ADAMTS19Q8TE59 1207 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 HTR3CQ8WXA8 447 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 IFT81Q8WYA0 676 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 LRRC45Q96CN5 670 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 HDAC11Q96DB2 347 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 RIPOR3Q96MK2 946 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 HINFPQ9BQA5 517 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 ADAM7Q9H2U9 754 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 C10orf88Q9H8K7 445 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 SEPT10Q9P0V9 454 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 STOML2Q9UJZ1 356 aa12.46□□□□□ -0.41
VPS16-206ENST00000466415 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.45□□□□□ -0.42
VPS16-206ENST00000466415 ZSCAN5CA6NGD5 496 aaPredicted RBP12.45□□□□□ -0.42
VPS16-206ENST00000466415 DYNC1I1O14576 645 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 MTSS1O43312 755 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 TBL1XO60907 577 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 NEBLO76041 1014 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 PRAMEF12O95522 483 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 RHOCP08134 193 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 TCF3P15923 654 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 ADCY8P40145 1251 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 GARSP41250 739 aaKnown RBP12.45□□□□□ -0.42
VPS16-206ENST00000466415 MTHFRP42898 656 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 VSNL1P62760 191 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 RPS24P62847 133 aaKnown RBP12.45□□□□□ -0.42
VPS16-206ENST00000466415 ZXDBP98169 803 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 PPIDQ08752 370 aaKnown RBP12.45□□□□□ -0.42
VPS16-206ENST00000466415 ZNF177Q13360 481 aaPredicted RBP12.45□□□□□ -0.42
VPS16-206ENST00000466415 CBX2Q14781 532 aaPredicted RBP12.45□□□□□ -0.42
VPS16-206ENST00000466415 PRKD1Q15139 912 aaPredicted RBP12.45□□□□□ -0.42
VPS16-206ENST00000466415 ZNF77Q15935 545 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 C5orf22Q49AR2 442 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 MPPE1Q53F39 396 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 PRPF38BQ5VTL8 546 aaKnown RBP12.45□□□□□ -0.42
VPS16-206ENST00000466415 TIGD7Q6NT04 549 aaPredicted RBP12.45□□□□□ -0.42
VPS16-206ENST00000466415 WDR93Q6P2C0 686 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 ARID3BQ8IVW6 561 aaPredicted RBP12.45□□□□□ -0.42
VPS16-206ENST00000466415 BBS7Q8IWZ6 715 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 NPAS3Q8IXF0 933 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 CCDC13Q8IYE1 715 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 CPXM2Q8N436 756 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 CELF5Q8N6W0 485 aaKnown RBP12.45□□□□□ -0.42
VPS16-206ENST00000466415 BBOF1Q8ND07 529 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 CASKIN2Q8WXE0 1202 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 SNF8Q96H20 258 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 FAM161BQ96MY7 647 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 LGMNQ99538 433 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 SLC39A8Q9C0K1 460 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 GDF3Q9NR23 364 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 PAK5Q9P286 719 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms