RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 A0A1W2PQF6 199 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 ZBTB24O43167 697 aaPredicted RBP10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 MAP3K7O43318 606 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 CBFA2T2O43439 604 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 SRGAP2O75044 1071 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 KRT3P12035 628 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 PDGFRAP16234 1089 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 NDUFV2P19404 249 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 GPD1P21695 349 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 BCKDHBP21953 392 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 RRM1P23921 792 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 CNR2P34972 360 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 SCNN1AP37088 669 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 ZNF75DP51815 510 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 SPEM2Q0P670 501 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 EIF4EBP2Q13542 120 aaPredicted RBP10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 AUHQ13825 339 aaKnown RBP10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 STARD3Q14849 445 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 EIF4HQ15056 248 aaKnown RBP10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 USP39Q53GS9 565 aaKnown RBP10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 ACAD10Q6JQN1 1059 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 FBXL22Q6P050 247 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 ADIPOR2Q86V24 386 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 RASSF3Q86WH2 238 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 PHF13Q86YI8 300 aaPredicted RBP10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 KIAA2013Q8IYS2 634 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 MCOLN2Q8IZK6 566 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 APCDD1Q8J025 514 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 DEFB119Q8N690 84 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 C3orf20Q8ND61 904 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 RUBCNQ92622 972 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 SPACA7Q96KW9 195 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 PRMT1Q99873 361 aaKnown RBP10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 NUP58Q9BVL2 599 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 MTG2Q9H4K7 406 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 THAP10Q9P2Z0 257 aaPredicted RBP10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 MYO1AQ9UBC5 1043 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 MYO6Q9UM54 1294 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 USP18Q9UMW8 372 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 CYP8B1Q9UNU6 501 aa10.05□□□□□ -0.8
RTFDC1-205ENST00000466260 CCDC163A0A0D9SF12 145 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 A0A1B0GVM2 712 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 ANKRD62A6NC57 917 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 TCAF2A6NFQ2 919 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 I6L893 689 aaPredicted RBP10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 SYNCRIPO60506 623 aaKnown RBP10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 CNTN5O94779 1100 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 MOCS3O95396 460 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 F9P00740 461 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 GYPCP04921 128 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 PLEKP08567 350 aaPredicted RBP10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 MZF1P28698 734 aaPredicted RBP10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 HOXA6P31267 233 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 CASP14P31944 242 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 RFC1P35251 1148 aaPredicted RBP10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 PBX1P40424 430 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 CTSOP43234 321 aaPredicted RBP10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 CXCR3P49682 368 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 STK19P49842 368 aaPredicted RBP10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 ST8SIA6P61647 398 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 RPL7AP62424 266 aaKnown RBP10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 CCDC14Q49A88 953 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 PITRM1Q5JRX3 1037 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 BRMS1LQ5PSV4 323 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 MPP7Q5T2T1 576 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 RNF219Q5W0B1 726 aaPredicted RBP10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 SCYL2Q6P3W7 929 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 DCUN1D2Q6PH85 259 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 WDR59Q6PJI9 974 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 TFAP2DQ7Z6R9 452 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 ZNF557Q8N988 423 aaPredicted RBP10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 OLIG1Q8TAK6 271 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 FIBINQ8TAL6 211 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 KIAA1524Q8TCG1 905 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 FAM172AQ8WUF8 416 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 ZNF653Q96CK0 615 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 RPL10LQ96L21 214 aaKnown RBP10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 GABRG3Q99928 467 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 ARRDC1-AS1Q9H2J1 176 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 SMOC1Q9H4F8 434 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 ARHGEF38Q9NXL2 777 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 MPP6Q9NZW5 540 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 KIAA1522Q9P206 1035 aaPredicted RBP10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 EBF1Q9UH73 591 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 INTS6Q9UL03 887 aaKnown RBP10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 PLA2G4CQ9UP65 541 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 PAXBP1Q9Y5B6 917 aa10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 TP53BP1Q12888 1972 aaPredicted RBP10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 ATXN2Q99700 1313 aaKnown RBP10.04□□□□□ -0.8
RTFDC1-205ENST00000466260 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 C2CD4BA6NLJ0 364 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 E9PAM4 449 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 DDX3XO00571 662 aaKnown RBP eCLIP10.03□□□□□ -0.82e-12■■■■□ 19.9
RTFDC1-205ENST00000466260 ATP5BP06576 529 aaKnown RBP10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 RHOCP08134 193 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 PRKCIP41743 596 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 DHPSP49366 369 aaPredicted RBP10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 CREB5Q02930 508 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 ELF2Q15723 593 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 PTPRNQ16849 979 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms