RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 TNNT3P45378 269 aaPredicted RBP3.53□□□□□ -1.84
SNX4-202ENST00000465505 KCNJ5P48544 419 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 CENPAP49450 140 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 TUBA1BP68363 451 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 KIF5AQ12840 1032 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 GRSF1Q12849 480 aaKnown RBP eCLIP3.53□□□□□ -1.84
SNX4-202ENST00000465505 MYO1EQ12965 1108 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 FHL1Q13642 323 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 GTF2H3Q13889 308 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 GBX1Q14549 363 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 PSMD6Q15008 389 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 PLCB4Q15147 1175 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 INAQ16352 499 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 ANKDD1AQ495B1 522 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 CCDC157Q569K6 752 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 METTL11BQ5VVY1 283 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 TPGS2Q68CL5 300 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 RETSATQ6NUM9 610 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 TLDC1Q6P9B6 456 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 CNSTQ6PJW8 725 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 TMCO3Q6UWJ1 677 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 KIRREL2Q6UWL6 708 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 ANGPTL8Q6UXH0 198 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 ATF7IPQ6VMQ6 1270 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 DSTYKQ6XUX3 929 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 LDHAL6AQ6ZMR3 332 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 ZNF517Q6ZMY9 492 aaPredicted RBP3.53□□□□□ -1.84
SNX4-202ENST00000465505 SEPT14Q6ZU15 432 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 TUBA1AQ71U36 451 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.53□□□□□ -1.84
SNX4-202ENST00000465505 ZER1Q7Z7L7 766 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 SLC9B2Q86UD5 537 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 ZNF280BQ86YH2 543 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 CNGA4Q8IV77 575 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 GALNT4Q8N4A0 578 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 CELF5Q8N6W0 485 aaKnown RBP3.53□□□□□ -1.84
SNX4-202ENST00000465505 TRIML2Q8N7C3 387 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 GBP7Q8N8V2 638 aaPredicted RBP3.53□□□□□ -1.84
SNX4-202ENST00000465505 PLBD2Q8NHP8 589 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 FBXO30Q8TB52 745 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 ADAMTS18Q8TE60 1221 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 SDCCAG3Q96C92 435 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 HMCESQ96FZ2 354 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 EPSTI1Q96J88 318 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 CNDP1Q96KN2 507 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 SNX18Q96RF0 628 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 MESP1Q9BRJ9 268 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 ADPGKQ9BRR6 497 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 NT5C3AQ9H0P0 336 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 TNMDQ9H2S6 317 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 SMARCAD1Q9H4L7 1026 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 SARS2Q9NP81 518 aaKnown RBP3.53□□□□□ -1.84
SNX4-202ENST00000465505 HELLSQ9NRZ9 838 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 MRGBPQ9NV56 204 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 HPF1Q9NWY4 346 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 NFKBIL1Q9UBC1 381 aaPredicted RBP3.53□□□□□ -1.84
SNX4-202ENST00000465505 CCNL1Q9UK58 526 aaPredicted RBP3.53□□□□□ -1.84
SNX4-202ENST00000465505 RIMKLBQ9ULI2 386 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 SHOC2Q9UQ13 582 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 CNPY2Q9Y2B0 182 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 SNX8Q9Y5X2 465 aa3.53□□□□□ -1.84
SNX4-202ENST00000465505 MAP3K19Q56UN5 1328 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 MROH5Q6ZUA9 1318 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 E5RJQ4 531 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 PDLIM1O00151 329 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 FCHO1O14526 889 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 APAF1O14727 1248 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 TSPAN3O60637 253 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 EXOC3O60645 756 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 DKC1O60832 514 aaKnown RBP eCLIP3.52□□□□□ -1.85
SNX4-202ENST00000465505 MBD4O95243 580 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 IL33O95760 270 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 MT-ND3P03897 115 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 CYP2A6P11509 494 aaPredicted RBP3.52□□□□□ -1.85
SNX4-202ENST00000465505 HOXB6P17509 224 aaKnown RBP3.52□□□□□ -1.85
SNX4-202ENST00000465505 LRPAP1P30533 357 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 PRKAR1BP31321 381 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 NF2P35240 595 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 RDXP35241 583 aaKnown RBP3.52□□□□□ -1.85
SNX4-202ENST00000465505 KRT20P35900 424 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 CCT4P50991 539 aaKnown RBP3.52□□□□□ -1.85
SNX4-202ENST00000465505 UCP3P55916 312 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 TPTEP56180 551 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 BASP1P80723 227 aaKnown RBP3.52□□□□□ -1.85
SNX4-202ENST00000465505 PPIDQ08752 370 aaKnown RBP3.52□□□□□ -1.85
SNX4-202ENST00000465505 IDI1Q13907 227 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 SCARB2Q14108 478 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 SAFBQ15424 915 aaKnown RBP eCLIP3.52□□□□□ -1.85
SNX4-202ENST00000465505 PPP1R7Q15435 360 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 OASLQ15646 514 aaKnown RBP3.52□□□□□ -1.85
SNX4-202ENST00000465505 LY6KQ17RY6 165 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 ZIK1Q3SY52 487 aaPredicted RBP3.52□□□□□ -1.85
SNX4-202ENST00000465505 Q4G0T1 1027 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 KRTCAP3Q53RY4 240 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 KCNT1Q5JUK3 1230 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 ATAT1Q5SQI0 421 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 PXDC1Q5TGL8 231 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 MIS18BP1Q6P0N0 1132 aa3.52□□□□□ -1.85
SNX4-202ENST00000465505 C4orf50Q6ZRC1 276 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms