RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CA9Q16790 459 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 SPANXN3Q5MJ09 141 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 IYDQ6PHW0 289 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 LCLAT1Q6UWP7 414 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 MPZL3Q6UWV2 235 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 CLEC14AQ86T13 490 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 ZBTB8OSQ8IWT0 167 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 UNC5BQ8IZJ1 945 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 MTMR14Q8NCE2 650 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 REPS2Q8NFH8 660 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 BHLHE22Q8NFJ8 381 aaPredicted RBP7.47□□□□□ -1.21
USP48-206ENST00000464577 RDH11Q8TC12 318 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 MAPK15Q8TD08 544 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 PDCD6IPQ8WUM4 868 aaKnown RBP7.47□□□□□ -1.21
USP48-206ENST00000464577 ARNTL2Q8WYA1 636 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 JDP2Q8WYK2 163 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 TOP1MTQ969P6 601 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 ZNF597Q96LX8 424 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 SPATA13Q96N96 652 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 OR52B2Q96RD2 323 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 CDRT15Q96T59 188 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 C2orf40Q9H1Z8 148 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 PRDM16Q9HAZ2 1276 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 SNX15Q9NRS6 342 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 NRBP2Q9NSY0 501 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 TXNDC16Q9P2K2 825 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 SLC17A6Q9P2U8 582 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 HMGXB4Q9UGU5 601 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 GTF2IRD1Q9UHL9 959 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 METRNQ9UJH8 293 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 USP21Q9UK80 565 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 KIAA1257Q9ULG3 409 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 RIPK3Q9Y572 518 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 hCG_2014768A0A024R1R8 64 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 SLCO1B7G3V0H7 640 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 G3V2L1 256 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 H3BSA7 217 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 ACOT8O14734 319 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 HDAC3O15379 428 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 GAS2O43903 313 aaKnown RBP7.46□□□□□ -1.22
USP48-206ENST00000464577 TRIM13O60858 407 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 APOA4P06727 396 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 C8BP07358 591 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 ZNF26P17031 533 aaPredicted RBP7.46□□□□□ -1.22
USP48-206ENST00000464577 TPP2P29144 1249 aaPredicted RBP7.46□□□□□ -1.22
USP48-206ENST00000464577 SDC4P31431 198 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 SERPINB5P36952 375 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 PSMD8P48556 350 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 LIMK2P53671 638 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 CDH8P55286 799 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 RAB15P59190 212 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 GBE1Q04446 702 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 INCA1Q0VD86 236 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 SLC10A2Q12908 348 aaPredicted RBP7.46□□□□□ -1.22
USP48-206ENST00000464577 CDO1Q16878 200 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 PPM1JQ5JR12 505 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 IRAK1BP1Q5VVH5 260 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 IER5Q5VY09 327 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 HEATR6Q6AI08 1181 aaKnown RBP7.46□□□□□ -1.22
USP48-206ENST00000464577 SCYL2Q6P3W7 929 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 CASC4Q6P4E1 433 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 KCNT2Q6UVM3 1135 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 AMIGO2Q86SJ2 522 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 CARM1Q86X55 608 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 BBS5Q8N3I7 341 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 TTC39CQ8N584 583 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 CNTD1Q8N815 330 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 TSPAN14Q8NG11 270 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 CEP70Q8NHQ1 597 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 HM13Q8TCT9 377 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 ZNF526Q8TF50 670 aaPredicted RBP7.46□□□□□ -1.22
USP48-206ENST00000464577 RCN3Q96D15 328 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 ATG4CQ96DT6 458 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 RBBP8Q99708 897 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 CCT7Q99832 543 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 OSBPL11Q9BXB4 747 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 ILKAPQ9H0C8 392 aaPredicted RBP7.46□□□□□ -1.22
USP48-206ENST00000464577 RPAP3Q9H6T3 665 aaPredicted RBP7.46□□□□□ -1.22
USP48-206ENST00000464577 WDR41Q9HAD4 459 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 PLGRKTQ9HBL7 147 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 PTPRHQ9HD43 1115 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 MRPL40Q9NQ50 206 aaKnown RBP7.46□□□□□ -1.22
USP48-206ENST00000464577 FAIMQ9NVQ4 179 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 HACD3Q9P035 362 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 VTI1BQ9UEU0 232 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 RAP2CQ9Y3L5 183 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 NR2E3Q9Y5X4 410 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 PSAT1Q9Y617 370 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 ANK1P16157 1881 aa7.46□□□□□ -1.22
USP48-206ENST00000464577 TTC36A6NLP5 189 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 ZNF701M0R085 212 aaPredicted RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 TRIM38O00635 465 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 DGKIO75912 1065 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 BMP10O95393 424 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 H6PDO95479 791 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 KRT19P08727 400 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 YBX3P16989 372 aaKnown RBP eCLIP7.45□□□□□ -1.22
USP48-206ENST00000464577 CYP3A5P20815 502 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 MGAT1P26572 445 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 SPRP35270 261 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms