RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 VAT1Q99536 393 aa22.3■■□□□ 1.16
PDLIM2-216ENST00000464275 CATSPERBQ9H7T0 1116 aa22.3■■□□□ 1.16
PDLIM2-216ENST00000464275 KIF9Q9HAQ2 790 aa22.3■■□□□ 1.16
PDLIM2-216ENST00000464275 HAUS2Q9NVX0 235 aa22.3■■□□□ 1.16
PDLIM2-216ENST00000464275 OSER1Q9NX31 292 aa22.3■■□□□ 1.16
PDLIM2-216ENST00000464275 HCSTQ9UBK5 93 aa22.3■■□□□ 1.16
PDLIM2-216ENST00000464275 TRHDEQ9UKU6 1024 aa22.3■■□□□ 1.16
PDLIM2-216ENST00000464275 PCDHA11Q9Y5I1 949 aa22.3■■□□□ 1.16
PDLIM2-216ENST00000464275 MAD1L1Q9Y6D9 718 aa22.3■■□□□ 1.16
PDLIM2-216ENST00000464275 KCNK1O00180 336 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 MGRN1O60291 552 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 TBC1D4O60343 1298 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 RTN3O95197 1032 aaPredicted RBP22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 C1QAP02745 245 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 SRGAP2BP0DMP2 458 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 IL9RQ01113 521 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 MANEALQ5VSG8 457 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 RWDD4Q6NW29 188 aaKnown RBP22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 C4orf33Q8N1A6 199 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 GSDMBQ8TAX9 411 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 GDAP1Q8TB36 358 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 DENND1AQ8TEH3 1009 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 TBC1D31Q96DN5 1066 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 PLAC1Q9HBJ0 212 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 MLXIPLQ9NP71 852 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 NEU3Q9UQ49 428 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 FAM92AA1XBS5 289 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 MTMR11A4FU01 709 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 KCNU1A8MYU2 1149 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 F5H423 210 aaPredicted RBP22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 PIAS1O75925 651 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 SLC8A1P32418 973 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 ATN1P54259 1190 aaPredicted RBP22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 CCL23P55773 120 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 ARPP19P56211 112 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 NRG1Q02297 640 aaPredicted RBP22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 NUGGCQ68CJ6 796 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 ANKS3Q6ZW76 656 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 SPATA21Q7Z572 469 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 PRPF39Q86UA1 669 aaKnown RBP22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 SLC26A11Q86WA9 606 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 LRRC43Q8N309 656 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 MPP5Q8N3R9 675 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 STKLD1Q8NE28 680 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 C2orf15Q8WU43 125 aaKnown RBP22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 ALKBH8Q96BT7 664 aaKnown RBP22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 COMMD8Q9NX08 183 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 GMIPQ9P107 970 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 NUDT5Q9UKK9 219 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 TLR6Q9Y2C9 796 aa22.29■■□□□ 1.16
PDLIM2-216ENST00000464275 SDR42E2A6NKP2 422 aa22.28■■□□□ 1.16
PDLIM2-216ENST00000464275 TYROBPO43914 113 aa22.28■■□□□ 1.16
PDLIM2-216ENST00000464275 SLC2A3P11169 496 aa22.28■■□□□ 1.16
PDLIM2-216ENST00000464275 YWHAQP27348 245 aa22.28■■□□□ 1.16
PDLIM2-216ENST00000464275 USP46P62068 366 aa22.28■■□□□ 1.16
PDLIM2-216ENST00000464275 ITPRIPL1Q6GPH6 555 aa22.28■■□□□ 1.16
PDLIM2-216ENST00000464275 CCNJLQ8IV13 435 aa22.28■■□□□ 1.16
PDLIM2-216ENST00000464275 LZTR1Q8N653 840 aa22.28■■□□□ 1.16
PDLIM2-216ENST00000464275 CCDC63Q8NA47 563 aa22.28■■□□□ 1.16
PDLIM2-216ENST00000464275 STAMBPL1Q96FJ0 436 aa22.28■■□□□ 1.16
PDLIM2-216ENST00000464275 FCRL2Q96LA5 508 aaPredicted RBP22.28■■□□□ 1.16
PDLIM2-216ENST00000464275 FGFR1OP2Q9NVK5 253 aa22.28■■□□□ 1.16
PDLIM2-216ENST00000464275 ZNF180Q9UJW8 692 aa22.28■■□□□ 1.16
PDLIM2-216ENST00000464275 NT5C1B-RDH14C9J2C7 533 aa22.27■■□□□ 1.16
PDLIM2-216ENST00000464275 KRT4P19013 534 aa22.27■■□□□ 1.16
PDLIM2-216ENST00000464275 FAAP100Q0VG06 881 aa22.27■■□□□ 1.16
PDLIM2-216ENST00000464275 RIPK1Q13546 671 aa22.27■■□□□ 1.16
PDLIM2-216ENST00000464275 RTP2Q5QGT7 225 aa22.27■■□□□ 1.16
PDLIM2-216ENST00000464275 STEAP4Q687X5 459 aa22.27■■□□□ 1.16
PDLIM2-216ENST00000464275 CYS1Q717R9 158 aa22.27■■□□□ 1.16
PDLIM2-216ENST00000464275 CCDC91Q7Z6B0 441 aa22.27■■□□□ 1.16
PDLIM2-216ENST00000464275 LRRC6Q86X45 466 aa22.27■■□□□ 1.16
PDLIM2-216ENST00000464275 TTC9BQ8N6N2 239 aa22.27■■□□□ 1.16
PDLIM2-216ENST00000464275 ZNF784Q8NCA9 323 aaPredicted RBP22.27■■□□□ 1.16
PDLIM2-216ENST00000464275 DEPDC1BQ8WUY9 529 aa22.27■■□□□ 1.16
PDLIM2-216ENST00000464275 SPATA17Q96L03 361 aa22.27■■□□□ 1.16
PDLIM2-216ENST00000464275 TGS1Q96RS0 853 aaKnown RBP22.27■■□□□ 1.16
PDLIM2-216ENST00000464275 TTPALQ9BTX7 342 aa22.27■■□□□ 1.16
PDLIM2-216ENST00000464275 PPP1R12CQ9BZL4 782 aa22.27■■□□□ 1.16
PDLIM2-216ENST00000464275 ASMTLO95671 621 aa22.27■■□□□ 1.15
PDLIM2-216ENST00000464275 HAPLN1P10915 354 aaPredicted RBP22.27■■□□□ 1.15
PDLIM2-216ENST00000464275 CA4P22748 312 aa22.27■■□□□ 1.15
PDLIM2-216ENST00000464275 PSEN1P49768 467 aa22.27■■□□□ 1.15
PDLIM2-216ENST00000464275 WDR4P57081 412 aaKnown RBP22.27■■□□□ 1.15
PDLIM2-216ENST00000464275 CCDC15Q0P6D6 951 aa22.27■■□□□ 1.15
PDLIM2-216ENST00000464275 SPARCL1Q14515 664 aa22.27■■□□□ 1.15
PDLIM2-216ENST00000464275 GALNTL6Q49A17 601 aa22.27■■□□□ 1.15
PDLIM2-216ENST00000464275 TEX44Q53QW1 395 aa22.27■■□□□ 1.15
PDLIM2-216ENST00000464275 RGS9BPQ6ZS82 235 aa22.27■■□□□ 1.15
PDLIM2-216ENST00000464275 CTAGE3PQ8IX95 158 aa22.27■■□□□ 1.15
PDLIM2-216ENST00000464275 PPM1NQ8N819 430 aa22.27■■□□□ 1.15
PDLIM2-216ENST00000464275 FBXO32Q969P5 355 aa22.27■■□□□ 1.15
PDLIM2-216ENST00000464275 SLC39A13Q96H72 371 aa22.27■■□□□ 1.15
PDLIM2-216ENST00000464275 C1orf74Q96LT6 269 aa22.27■■□□□ 1.15
PDLIM2-216ENST00000464275 TOX2Q96NM4 488 aa22.27■■□□□ 1.15
PDLIM2-216ENST00000464275 GBA3Q9H227 469 aa22.27■■□□□ 1.15
PDLIM2-216ENST00000464275 CLIC5Q9NZA1 410 aa22.27■■□□□ 1.15
PDLIM2-216ENST00000464275 ERI2A8K979 691 aaKnown RBP22.26■■□□□ 1.15
PDLIM2-216ENST00000464275 ZBTB24O43167 697 aaPredicted RBP22.26■■□□□ 1.15
PDLIM2-216ENST00000464275 ZWINTO95229 277 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms